| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 345369 | 56 (1.330) | 4 (0.100) | 4/246 | NT | 6.8% | coding (234/1068 nt) | mutY | A/G‑specific adenine glycosylase |
| ? | NC_002947 | = 345427 | 56 (1.390) | coding (176/1068 nt) | mutY | A/G‑specific adenine glycosylase | |||||
TGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/345218‑345369‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcccTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGCGGCGAATTCCCGCG < NC_002947/345427‑345286 TGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGG > 6:71776/1‑149 TGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCC < 5:71776/149‑1 GCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGC > 5:83797/1‑119 GCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGC < 6:83797/119‑1 AATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACC > 7:46588/1‑149 CTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGT > 3:27524/1‑149 CTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGC < 4:27524/149‑1 GGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGC < 8:46588/149‑1 AGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGCGGCGAATTCACGCG > 2:161042/1‑148 TGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/345218‑345369‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcccTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGCGGCGAATTCCCGCG < NC_002947/345427‑345286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |