| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 505818 = | 49 (1.160) | 6 (0.150) | 5/246 | NT | 10.8% | coding (312/1482 nt) | trpE | anthranilate synthase component 1 |
| ? | NC_002947 | 505877 = | 52 (1.290) | coding (371/1482 nt) | trpE | anthranilate synthase component 1 | |||||
AGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/505958‑505818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actttgGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGTT > NC_002947/505877‑506021 AGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAA > 3:263600/1‑136AGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAA < 4:263600/136‑1 CCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTG > 2:230476/1‑149 CCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGCGATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGAGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTG > 4:81922/1‑149 AAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTC > 8:160347/1‑149 CCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCG < 7:160347/149‑1 GCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTG < 1:230476/147‑1 gtATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGAT < 3:81922/145‑1 TGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTTTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGTT < 6:31280/147‑1 AGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/505958‑505818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actttgGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGTT > NC_002947/505877‑506021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |