| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 742597 = | NA (NA) | 7 (0.170) | 5/252 | NT | NA | coding (698/1422 nt) | PP_0635 | group II intron‑encoding maturase |
| ? | NC_002947 | 742657 = | NA (NA) | coding (758/1422 nt) | PP_0635 | group II intron‑encoding maturase | |||||
CTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/742747‑742597‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTCT > NC_002947/742657‑742804 CTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGAC < 4:228032/149‑1 TGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGAC > 7:59364/1‑148 CGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGA < 3:14651/148‑1 CGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGAC > 3:113348/1‑98 CGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGAC < 4:113348/98‑1 GCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGAC < 6:27663/84‑1 GCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGAC > 5:27663/1‑84 AGGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTA > 5:37575/1‑149 AGGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCGCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATAGCTTCGTACGTTATGCCGATGATGCGAACATCga > 8:39128/1‑147 GGATATTCGACAGCAACGGCGAGAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTAT > 2:91323/1‑149 CAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCC > 3:250566/1‑149 GAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGG < 4:250566/149‑1 GCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAA < 1:91323/149‑1 GGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGG < 7:168450/149‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTC < 4:16347/149‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTC > 6:237794/1‑149 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGT < 5:6543/148‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGT < 8:220392/148‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCA > 4:221525/1‑92 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCA < 3:221525/92‑1 GAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTACGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTC > 6:18021/1‑149 AATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTCT < 5:235056/149‑1 AATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTCT > 6:71143/1‑149 AATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTCT > 7:185353/1‑149 AATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCAAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTCT < 6:52820/149‑1 CTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGGATATTCGACAGCAACGGCGAAAGCGGGCCGCCTTGCGGCGTCCCCTCCTGCCGTGGGCTGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/742747‑742597‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGAGAACGTCT > NC_002947/742657‑742804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |