New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1286992	50 (1.180)	5 (0.130)	5/238	NT	9.2%	coding (375/2145 nt)	PP_1125	putative Helicase
	?	NC_002947	= 1287049	52 (1.340)					coding (432/2145 nt)	PP_1125	putative Helicase

CCATCCCGGCGGCCAAGGCCGCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1286844‑1286992 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccgtggcTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCACAGATAGCGGCCACGGCCCTTGGCCAGGGCGAAGCTGAAGTTGAGGCCGCTGCTGCGCATCAGGTCGGGCAGGTCCTTGAA  <  NC_002947/1287049‑1286921                                                                                                                                                                                                                                                                                        CCATCCCGGCGGCCAAGGCCGCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGG                                                                                                                                    <  5:92946/148‑1                  GCCGCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGC                                                                                                                                   <  3:74753/132‑1                  GCCGCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGC                                                                                                                                   >  4:74753/1‑132                                           CCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGA                                                                                         >  8:36003/1‑149                                                   ACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCA                                                                                   >  4:137868/1‑147                                                                    ACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCACAGATAGCGGCCACGGCCC                                                                <  7:36003/149‑1                                                                      AGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCACAGATAGCGGCCACGGCCCTT                                                              <  3:137868/149‑1                                                                           GTCTTCACGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTCGCCAAGGGCCGTGGCTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCACAGATAGCGGCCACGGCCCTTGGCCA                                                         <  7:238387/149‑1                                                                                                                                             GGCCGTGGCTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCACAGATAGCGGCCACGGCCCTTGGCCAGGGCGAAGCTGAAGTTGAGGCCGCTGCTGCGCATCAGGTCGGGCAGGTCCTTGAA  >  1:233935/1‑138                                                                                                                                             GGCCGTGGCTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCACAGATAGCGGCCACGGCCCTTGGCCAGGGCGAAGCTGAAGTTGAGGCCGCTGCTGCGCATCAGGTCGGGCAGGTCCTTGAA  <  2:233935/138‑1                                                                                                                                                                                                                                                                                        CCATCCCGGCGGCCAAGGCCGCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1286844‑1286992 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccgtggcTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCACAGATAGCGGCCACGGCCCTTGGCCAGGGCGAAGCTGAAGTTGAGGCCGCTGCTGCGCATCAGGTCGGGCAGGTCCTTGAA  <  NC_002947/1287049‑1286921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.