New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1838080	53 (1.260)	3 (0.080)	3/238	NT	5.5%	intergenic (+27/+77)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	= 1838142	54 (1.390)					intergenic (+89/+15)	PP_1642/PP_1643	hypothetical protein/membrane protein

TGATCGACAAGCAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1837923‑1838080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaCGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATGGGAGCAACACAAGGCTCAATGGTTGACGGTGTGCGCCAGCATCACCGACAACTGGCACAGC  <  NC_002947/1838142‑1838008                                                                                                                                                                                                                                                                                                       TGATCGACAAGCAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCAT                                                                                                                                                  >  1:58129/1‑149    TCGACAAGCAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCG                                                                                                                                               <  1:217588/149‑1    TCGACAAGCAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCG                                                                                                                                               >  4:161883/1‑149         AAGCAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGG                                                                                                                                           >  5:230888/1‑148                                                           CCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACT                                                                                        >  8:109009/1‑149                                                               TGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGG                                                                                    <  7:109009/149‑1                                                                  CATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAG                                                                                 <  2:64104/149‑1                                                                                                                                                      TCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATGGGAGCAACACAAGGCTCAATGGTTGACGGTGTGCGCCAGCATCACC                 <  8:112676/129‑1                                                                                                                                                        GCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATGGGAGCAACACAAGGCTCAATGGTTGACGGTGTGCGCCAGCATCACCGACAACTGGCACAGC  >  5:71524/1‑142                                                                                                                                                        GCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATGGGAGCAACACAAGGCTCAATGGTTGACGGTGTGCGCCAGCATCACCGACAACTGGCACAGC  <  6:71524/142‑1                                                                                                                                                                                                                                                                                                       TGATCGACAAGCAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1837923‑1838080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaCGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATGGGAGCAACACAAGGCTCAATGGTTGACGGTGTGCGCCAGCATCACCGACAACTGGCACAGC  <  NC_002947/1838142‑1838008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.