New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2048810 | 29 (0.690) | 4 (0.110) | 4/224 | NT | 15.0% | intergenic (+49/+90) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein |
? | NC_002947 | = 2048867 | 20 (0.550) | intergenic (+106/+33) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein |
GCCTACACCCATGTGGCGCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2048648‑2048810 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgtgggagcgggcgAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGATTGCGCAAGCGCCTGGAAAACAGGTCGGTTTTCAGCCCACCATCGGCACATGCCGCGGGTGGCTGCTGACC < NC_002947/2048867‑2048722 GCCTACACCCATGTGGCGCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCT > 1:17140/1‑149 CACCCATGTGGCGCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGT < 8:183890/147‑1 CCATGTGGCGCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGacca > 3:177535/1‑145 GGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGG > 1:244145/1‑149 GCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCGTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCA < 2:244145/149‑1 GTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCT > 3:132725/1‑104 GTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCT < 4:132725/104‑1 CCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGATTGCGCAAGCGCCTGGAAAACAGGTCGGTTTTCAGCCCACCATCGGCACATGCCGCG > 4:74301/1‑149 GTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGATTGCGCAAGCGCCTGGAAAACAGGTCGGTTTTCAGCCCACCATCGGCACATGCCGCGGGT < 2:16231/148‑1 GGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGATTGCGCACGCGCCTGGAAAACAGGTCGGTTTTCAGCCCACCATCGGCACATGCCGCGGGTGGCT > 6:167218/1‑149 GGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGATTGCGCAAGCGCCTGGAAAACAGGTCGGTTTTCAGCCCACCATCGGCACATGCCGCGGGTGGCT < 4:185075/149‑1 GCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGATTGCGCAAGCGCCTGGAAAACAGGTCGGTTTTCAGCCCACCATCGGCACATGCCGCGGGTGGCTGCT < 5:196024/149‑1 CGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGATTGCGCAAGCGCCTGGAAAAC > 1:130721/1‑102 CGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGATTGCGCAAGCGCCTGGAAAAC < 2:130721/102‑1 GCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGATTGCGCAAGCGCCTGGAAAACAGGTCGGTTTTCAGCCCACCATCGGCACATGCCGCGGGTGGCTGCTGACC < 8:222389/149‑1 GCCTACACCCATGTGGCGCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2048648‑2048810 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgtgggagcgggcgAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGATTGCGCAAGCGCCTGGAAAACAGGTCGGTTTTCAGCCCACCATCGGCACATGCCGCGGGTGGCTGCTGACC < NC_002947/2048867‑2048722 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |