New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4035709	50 (1.180)	4 (0.100)	4/244	NT	7.1%	coding (760/2145 nt)	PP_3557	methyl‑accepting chemotaxis transducer
	?	NC_002947	= 4035764	58 (1.450)					coding (815/2145 nt)	PP_3557	methyl‑accepting chemotaxis transducer

TGCGTGGTAGAGCCGTACTTCTACGACATCGATGGCCAGCAGGTGCTGATGACCAGCATCGTGTTCCCGCTGGCGGTCAACGGCAAGATCATTGCCACCCTGTCCATCGACATCAACCTCAATAGCCTGCAGGCACTGAGCCAGGAGGCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4035556‑4035709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagccAACAGACCGACCGGGGTGAGAATGCCGACCGTGGTGCGGCCTTCGTAGAGGCTGCGGCTGGCCTCCTGGCTCAGTGCCTGCAGGCTATTGAGGTTGATGTCGATGGACAGGGTGGCAATGATCTTGCCGTTGACCGCCAGCGG  <  NC_002947/4035764‑4035622                                                                                                                                                                                                                                                                                                           TGCGTGGTAGAGCCGTACTTCTACGACATCGATGGCCAGCAGGTGCTGATGACCAGCATCGTGTTCCCGCTGGCGGTCAACGGCAAGATCATTGCCACCCTGTCCATCGACATCAACCTCAATAGCCTGCAGGCACTGAGCCAGGAGG                                                                                                                                                       <  4:148923/148‑1  GCGTGGTAGAGCCGTACTTCTACGACATCGATGGCCAGCAGGTGCTGATGACCAGCATCGTGTTCCCGCTGGCGGTCAACGGCAAGATCATTGCCACCCTGTCCATCGACATCAACCTCAATAGCCTGCAGGCACTGAGCCAGGAGGC                                                                                                                                                      >  3:239444/1‑148   CGTGGTAGAGCCGTACTTCTACGACATCGATGGCCAGCAGGTGCTGATGACCAGCATCGTGTTCCCGCTGGCGGTCAACGGCAAGATCATTGCCACCCTGTCCATCGACATCAACCTCAATAGCCTCCTGGCTCAGTGCCTGCAGGCta                                                                                                                                                    <  4:95939/149‑3                                                GATGACCAGCATCGTGTTCCCGCTGGCGGTCAACGGCAAGATCATTGCCACCCTGTCCATCGACATCAACCTCAATAGCCTGCAGGCACTGAGCCAGGAGGCCAGCCAACAGACCGACCGGGGTGAGAATGCCGACCGTGGTGCGGCCT                                                                                                       >  1:162271/1‑149                                                                TTCCCGCTGGCGGTCAACGGCAAGATCATTGCCACCCTGTCCATCGACATCAACCTCAATAGCCTGCAGGCACTGAGCCAGGAGGCCAGCCAACAGACCGACCGGGGTGAGAATGCCGACCGTGGTGCGGCCTTCGTAGAGGCTGCGGC                                                                                       >  8:216877/1‑149                                                                TTCCCGCTGGCGGTCAACGGCAAGATCATTGCCACCCTGTCCATCGACATCAACCTCAATAGCCTGCAGGCACTGAGCCAGGAGGCCAGCCAACAGACCGACCGGGGTGAGAATGCCGACCGTGGTGCGGCCTTCGTAGAGGCTGCGG                                                                                        <  2:162271/148‑1                                                                         GCGGTCAACGGCAAGATCATTGCCACCCTGTCCATCGACATCAACCTCAATAGCCTGCAGGCACTGAGCCAGGAGGCCAGCCAACAGACCGACCGGGGTGAGAATGCCGACCGTGGTGCGGCCTTCGTAGAGGCTGCGGCTGGCCTCC                                                                               <  7:216877/148‑1                                                                                                                                                    GCCAGCCAACAGACCGACCGGGGTGAGAATGCCGACCGTGGTGCGGCCTTCGTAGAGGCTGCGGCTGGCCTCCTGGCTCAGTGCCTGCAGGCTATTGAGGTTGATGTCGATGGACAGGGTGGCAATGATCTTGCCGTTGACCGCCAGC    <  2:6652/148‑1                                                                                                                                                     CCAGCCAACAGACCGACCGGGGTGAGAATGCCGACCGTGGTGCGGCCTTCGTAGAGGCTGCGGCTGGCCTCCTGGCTCAGTGCCTGCAGGCTATTGAGGTTGATGTCGATGGACAGGGTGGCAATGATCTTGCCGTTGACCGCCAGCGG  >  6:25242/1‑149                                                                                                                                                     CCAGCCAACAGACCGACCGGGGTGAGAATGCCGACCGTGGTGCGGCCTTCGTAGAGGCTGCGGCTGGCCTCCTGGCTCAGTGCCTGCAGGCTATTGAGGTTGATGTCGATGGACAGGGTGGCAATGATCTT                    <  7:77688/131‑1                                                                                                                                                     CCAGCCAACAGAACGACCGGGGTGAGAATGCCGACCGTGGTGCGGCCTTCGTAGAGGCTGCGGCTGGCCTCCTGGCTCAGTGCCTGCAGGCTATTGAGGTTGATGTCGATGGACAGGGTGGCAATGATCTT                    >  8:77688/1‑131                                                                                                                                                      CAGCCAACAGACCGACCGGGGTGAGAATGCCGACCGTGGTGCGGCCTTCGTAGAGGCTGCGGCTGGCCTCCTGGCTCAGTGCCTGCAGGCTATTGAGGTTGATGTCGATGGACAGGGTGGCAATGATCTTGCCGTTGACCGCCAGCGG  >  2:74261/1‑148                                                                                                                                                                                                                                                                                                           TGCGTGGTAGAGCCGTACTTCTACGACATCGATGGCCAGCAGGTGCTGATGACCAGCATCGTGTTCCCGCTGGCGGTCAACGGCAAGATCATTGCCACCCTGTCCATCGACATCAACCTCAATAGCCTGCAGGCACTGAGCCAGGAGGCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4035556‑4035709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagccAACAGACCGACCGGGGTGAGAATGCCGACCGTGGTGCGGCCTTCGTAGAGGCTGCGGCTGGCCTCCTGGCTCAGTGCCTGCAGGCTATTGAGGTTGATGTCGATGGACAGGGTGGCAATGATCTTGCCGTTGACCGCCAGCGG  <  NC_002947/4035764‑4035622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.