New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4272869	55 (1.300)	3 (0.080)	3/244	NT	5.4%	coding (163/318 nt)	PP_3743	hypothetical protein
	?	NC_002947	= 4272876	53 (1.330)					coding (170/318 nt)	PP_3743	hypothetical protein

CTGCTCGCCCCTGCGCTGCTGCTCCTGATGCCTGCCGGTGCTGCCCTGGCCCGCGTCGATGCGGGCGACGTCGCCACCTCGGCCGGTATTTCCGCTTCGCTGTATTCGACCTTCAAGGACGACAAACGGATCATCCCTGCCCGTGACGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4272719‑4272869 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgaacGCTGAAAGTTCGTCACGGGCAGGGATGATCCGTTTGTCGTCCTTGAAGGTCGAATACAGCGAAGCGGAAATACCGGCCGAGGTGGCGACGTCGCCCGCATCGACGCGGGCCAGGGCAGCACCGGCAGGCATCAGGAGCAGCAGCG  <  NC_002947/4272876‑4272732                                                                                                                                                                                                                                                                                                          CTGCTCGCCCCTGCGCTGCTGCTCCTGATGCCTGCCGGTGCTGCCCTGGCCCGCGTCGATGCGGGCGACGTCGCCACCTCGGCCGGTATTTCCGCTTCGCTGTATTCGACCTTCAAGGACGACAAACGGATCATCCCTGCCCGTGAC                                                                                                                                                       <  5:153820/147‑1  TGCTCGCCCCTGCGCTGCTGCTCCTGATGCCTGCCGGTGCTGCCCTGGCCCGCGTTGATGCGGGCGACGTCGCCACCTCGGCCGGTATTTCCGCTTCGCTGTATTCGACCTTCAAGGACGACAAACGGATCATCCCTGCCCGTGACGAA                                                                                                                                                    >  2:15116/1‑149                                                                                                            GACCTTCACGGACGACAACCGGATCATCCCTGCCCGTGACGAACTTTCCGCGTTCGTCACGGGCAGGGATGATCCGTTTGTCGTCCTTGAAGGTCGAATACAGCGAAGCGGAAATACCGGCCGAGGTGGCGACGT                                                        <  4:156630/135‑1                                                                                                            GACCTTCAAGGACGACAAACGGATCATCCCTGCCCGTGACGCACTGTCAGCGGTCGTCACGGGCAGGGATGATCCGGTTGTCGTCCTTGAAGGTCGAATACAGCGAAGCGGAAATACCGGCCGAGGTGGCGACGT                                                        >  3:156630/1‑135                                                                                                               CTTCAAGGACGACAAACGGATCATCCCTGCCCGTGACGAACTTTCAGCGTTCGTCACGGGCAGGGATGCTCCGTTTGTCGTCCTTGAAGGTCGAATACAGCGAAGCGGAAATACCGGCCGAGGTGGCGACGTCGCCCGCATCGACGCGG                                       >  7:187854/1‑149                                                                                                                                                 GACGAACGCTGAAAGTTCGTCACGGGCAGGGATGATCCGTTTGTCGTCCTTGAAGGTCGAATACAGCGAAGCGGAAATACCGGCCGAGGTGGCGACGTCGACCGCATCGACGCGGGCCAGGGCAGCACCGGCAGGCATCAGGAGCAGCA     >  8:137629/1‑149                                                                                                                                                    GAACGCTGAAAGTTCGTCACGGGCAGGGATGATCCGTTTGTCGTCCTTGAAGGTCGAATACAGCGAAGCGGAAATACCGGCCGAGGTGGCGACGTCGCCCGCATCGACGCGGGCCAGGGCAGCACCGGCAGGCATCAGGAGCAGCAGCG  >  1:70504/1‑149                                                                                                                                                    GAACGCTGAAAGTTCGTCACGGGCAGGGATGATCCGTTTGTCGTCCTTGAAGGTCGAATACAGCGAAGCGGAAATACCGGCCGAGGTGGCGACGTCGCCCGCATCGACGCGGGCCAGGGCAGCACCGGCAGGCATCAGGAGCAGCAGCG  <  4:207841/149‑1                                                                                                                                                                                                                                                                                                          CTGCTCGCCCCTGCGCTGCTGCTCCTGATGCCTGCCGGTGCTGCCCTGGCCCGCGTCGATGCGGGCGACGTCGCCACCTCGGCCGGTATTTCCGCTTCGCTGTATTCGACCTTCAAGGACGACAAACGGATCATCCCTGCCCGTGACGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4272719‑4272869 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgaacGCTGAAAGTTCGTCACGGGCAGGGATGATCCGTTTGTCGTCCTTGAAGGTCGAATACAGCGAAGCGGAAATACCGGCCGAGGTGGCGACGTCGCCCGCATCGACGCGGGCCAGGGCAGCACCGGCAGGCATCAGGAGCAGCAGCG  <  NC_002947/4272876‑4272732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.