New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4569586	61 (1.450)	3 (0.070)	3/246	NT	5.2%	coding (1516/2070 nt)	malQ	4‑alpha‑glucanotransferase
	?	NC_002947	= 4569622	52 (1.290)					coding (1552/2070 nt)	malQ	4‑alpha‑glucanotransferase

GAGGGCGCCTACCTCGACTACCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4569484‑4569586 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccgCTTTCTCGGCCAGCTTTTCGCGCAGGCTGTCGGGCACGGTGCCCAGGTCTTCACCCAGGATGATCGCCTGGTGACGCACCGACTCCAGCGCCAGCAGGCGCAACAGGTCGTCTAGCGGGTAGTCGAGGTAGGCGCCCTCGCTGGGT  <  NC_002947/4569622‑4569477                                                                                                                                                                                                                                                           GAGGGCGCCTACCTCGACTACCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGCTTTCTCGGCCAGCTTTTCGCGCAGGCTGTCGGGCACGGTGCCCAG                                                                                                      <  7:112256/149‑1                                                   GCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGCTTTCTCGGCCAGCTTTTCGCGCAGGCTGTCGGGCACGGTGCCCA                                                                                                       >  1:207145/1‑98                                                   GCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGCTTTCTCGGCCAGCTTTTCGCGCAGGCTGTCGGGCACGGTGCCCA                                                                                                       <  2:207145/98‑1                                                                                                    ACCGCTTTCTCGGCCAGCTTTTCGCGCAGGCTGTCGGGCACGGTGCCCAGGTCTTCACCCAGGATGATCGCCTGGTGACGCACCGACTCCAGCGCCAGCAGGCGCAACAGGTCGTCTAGCGGGTAGTCGAGGTAGGCGCCCTCGCTGGG   <  6:210311/149‑1                                                                                                     CCGCTTTCTCGGCCAGCTTTTCGCGCAGGCTGTCGGGCACGGTGCCCAGGTCTTCACCCAGGATGATCGCCTGGTGACGCACCGACTCCAGCGCCAGCAGGCGCAACAGGTCGTCTAGCGGGTAGTCGAGGTAGGCGCCCTCGCTGGGT  >  2:51286/1‑149                                                                                                                                                                                                                                                           GAGGGCGCCTACCTCGACTACCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4569484‑4569586 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccgCTTTCTCGGCCAGCTTTTCGCGCAGGCTGTCGGGCACGGTGCCCAGGTCTTCACCCAGGATGATCGCCTGGTGACGCACCGACTCCAGCGCCAGCAGGCGCAACAGGTCGTCTAGCGGGTAGTCGAGGTAGGCGCCCTCGCTGGGT  <  NC_002947/4569622‑4569477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.