| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4740646 = | 63 (1.490) | 4 (0.100) | 3/242 | NT | 6.8% | coding (1173/1290 nt) | gltA | citrate synthase |
| ? | NC_002947 | 4740685 = | 50 (1.260) | coding (1212/1290 nt) | gltA | citrate synthase | |||||
CCCGAGGGCAGCCTTCTTGCGTTCGGCTACTGCAGCTTACTTGCGGTCTTTCAGGGCAACGATGTCGCGCTTCTGCTCGCCGGTGTACAGCTGGCGCGGACGGCCGATCTTGTACGGGCTGGAGAGCATTTCTTTCCAGTGCGAGATCCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4740799‑4740646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccagcccGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTTATTTTTCTGGTGCCGGCCTC > NC_002947/4740685‑4740831 CCCGAGGGCAGCCTTCTTGCGTTCGGCTACTGCAGCTTACTTGCGGTCTTTCAGGGCAACGATGTCGCGCTTCTGCTCGCCGGTGTACAGCTGGCGCGGACGGCCGATCTTGTACGGGCTGGAGAGCATTTCTTTCCAGTGCGAGATC > 6:193569/1‑148 gatGGCAGACTTCTTGCGTTCGTCTACTTCAGCTTACTTGCGGTCTTTCAGGGCAACGATGGCGCGCTTCTGCTCGCCGGTGTACAGCTGGCGCGGACGGCCTATCTTGTACGGGCTGGAGAGCATTTCTTTCCAGTGCGAGATCCAGC < 6:164356/146‑1 GCGTTCGGCTACTGCAGCTTACTTGCGGTCTTTCAGGGCATCGATGTCGCGCTTCTGCTCGCCGGTGTACAGCTGGCGCGGACGGCCGATCTTGTACGGGCTGGAGAGCATTTCTTTCCAGTGCGAGATCCAGC < 2:97040/134‑1 GCGTTCGGCTACTGCAGCTTACTTGCGGTCTTTCAGGGCAACGATGTCGCGCTTCTGCTCGCCGGTGTACAGCTGGCGCGGACGGCCGATCTTGTACGGGCTGGAGAGCATTTCTTTCCAGTGCGAGATCCAGC > 1:97040/1‑134 GTACGGGCTGGAGAGCATTTCTTTCCAGTGCGAGATCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAA > 1:217325/1‑110 GTACGGGCTGGAGAGCATTTCTTTCCAGTGCGAGATCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAA < 2:217325/110‑1 CGGGCTGGAGAGCATTTCTTTCCAGTGCGAGATCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAACCTGCAGTAGCCGAACGCAAGAAGGCTGCa > 3:47223/1‑148 TCCAGTGCGAGATCCAGCCCGTACAAGAGCGGCAGTCCGCGCCTGCGGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCATGTAAGCTGCAGTAGCCGAACGCAAGCAGGCTGCCCTCGGGCAGCCTTTTTTat < 4:47223/148‑3 TCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAAAAGGCTGCCCGAGGGCAGCCTTCTT < 7:19732/133‑1 TCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAAAAGGCTGCCCGAGGGCAGCCTTCTT > 8:19732/1‑133 CCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTC > 4:150675/1‑149 CCCGAGGGCAGCCTTCTTGCGTTCGGCTACTGCAGCTTACTTGCGGTCTTTCAGGGCAACGATGTCGCGCTTCTGCTCGCCGGTGTACAGCTGGCGCGGACGGCCGATCTTGTACGGGCTGGAGAGCATTTCTTTCCAGTGCGAGATCCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4740799‑4740646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccagcccGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTTATTTTTCTGGTGCCGGCCTC > NC_002947/4740685‑4740831 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |