New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5611557 = | 56 (1.330) | 3 (0.080) | 3/240 | NT | 5.3% | coding (551/1176 nt) | PP_4931 | hypothetical protein |
? | NC_002947 | 5611609 = | 56 (1.430) | coding (603/1176 nt) | PP_4931 | hypothetical protein |
GCCCTTGGCCATGACCATGTGCAGCGGGCGGGTTTGCATGGCCGGCTGATCCAGGCCCAGCGCCTGCAGCAAGCCTTCGGTGCCGGCTCCGGCGCTCAATACGATGCGTTGGGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACCAACGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5611711‑5611557 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaacgcatCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCC > NC_002947/5611609‑5611755 GCCCTTGGCCATGACCATGTGCAGCGGGCGGGTTTGCATGGCCGGCTGATCCAGGCCCAGCGCCTGCAGCAAGCCTACGGTGCCGGCTCAGGCGCTCAATACGATGCGTAGGGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACa > 7:111181/1‑147 GGCCATGACCATGTGCAGCGGGCGGGTTTGCATGGCCGGCTGATCCAGGCCCAGCGCCTGCAGCAAGCCTTCGGTGCCGGCTCCGGCGCTCAATACGATGCGTTGGGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACCAACGCA < 7:199786/148‑1 GGCCATGACCATGTGCAGCGGGCGGGTTTGCATGGCCGGCTGATCCAGGCCCAGCGCCTGCAGCAAGCCTTCGGTGCCGGCTCCGGCGCTCAATACGATGCGTTGGGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACCAACGC < 6:41219/147‑1 GATGCGTTGGGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGC > 3:47469/1‑149 GTTGGGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGG > 1:138596/1‑101 GTTGGGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACCAACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGG < 2:138596/101‑1 CAACGCATCATATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGC > 7:117135/1‑91 CAACGCATCATATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGC < 8:117135/91‑1 AACGCATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGC > 1:112337/1‑149 CATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGC < 8:203150/149‑1 CATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTAC < 3:57573/127‑1 CATCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTAC > 4:57573/1‑127 TCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCC > 6:1294/1‑148 GCCCTTGGCCATGACCATGTGCAGCGGGCGGGTTTGCATGGCCGGCTGATCCAGGCCCAGCGCCTGCAGCAAGCCTTCGGTGCCGGCTCCGGCGCTCAATACGATGCGTTGGGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACCAACGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5611711‑5611557 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaacgcatCGTATTGAGCGCCGGAGCCGGCACCGAAGGCTTGCTGCAGGCGCTGGGCCTGGATCAGCCGGCCATGCAAACCCGCCCGCTGCACATGGTCATGGCCAAGGGCCCGAACCTCAAACCTTTGTACGCCCACTGCCTCGGCGGCGGGCC > NC_002947/5611609‑5611755 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |