| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5884743 | 63 (1.490) | 5 (0.120) | 4/246 | NT | 7.8% | coding (396/624 nt) | PP_5159 | hypothetical protein |
| ? | NC_002947 | = 5884769 | 58 (1.440) | coding (370/624 nt) | PP_5159 | hypothetical protein | |||||
GAGGCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5884592‑5884743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggCACCTGGATCGTTTTCGCGACGATGACCGGCGCATGGTCTCGGCGGTGCTTTACCTCAATGAAGGCTGGCAACCGCATGACGGTGGCCAGTTGCGCATGTTCCTGGCCGACGGTGTCGAGCACGATGTCGAGCCAGTGGCCGGTT < NC_002947/5884769‑5884625 GAGGCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGC > 1:259566/1‑149GAGGCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGAGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACAATGCGC > 1:263671/1‑149 GGCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCG < 2:150113/149‑1 GCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGG > 2:66078/1‑149 GCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGG > 3:93162/1‑149 GGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCGCA < 8:199927/149‑1 TCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCGCATG < 7:57372/129‑1 TCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCGCATG > 8:57372/1‑129 TCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCGCAT < 1:61514/128‑1 TCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCGCAT > 2:61514/1‑128 ACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGC < 5:246635/87‑1 CGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCGCATGGTCTCGGCGGTGCTTTACCTCAATGAAGGCTGGCAACCGCATGACGGTGGCCAGTTGCGCATGTTCCTGGCCGACGGTGTCGAGCACGATGTCGAGC > 7:247380/1‑139 CGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCGCATGGTCTCGGCGGTGCTTTACCTCAATGAAGGCTGGCAACCGCATGACGGTGGCCAGTTGCGCATGTTCCTGGCCGACGGTGTCGAGCACGATGTCGAGC < 8:247380/139‑1 CCGGCACCTGGATCGTTTTCGCGACGATGACCGGCGCATGGTCTCGGCGGTGCTTTACCTCAATGAAGGCTGGCAACCGCATGACGGTGGCCAGTTGCGCATGTTCCTGGCCGATGGTGTCGAGCACGATGTCGAGCCAGTGGCCGGTT < 1:172865/149‑1 GAGGCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5884592‑5884743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggCACCTGGATCGTTTTCGCGACGATGACCGGCGCATGGTCTCGGCGGTGCTTTACCTCAATGAAGGCTGGCAACCGCATGACGGTGGCCAGTTGCGCATGTTCCTGGCCGACGGTGTCGAGCACGATGTCGAGCCAGTGGCCGGTT < NC_002947/5884769‑5884625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |