| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5935863 = | 62 (1.470) | 7 (0.170) | 6/248 | NT | 10.4% | coding (42/297 nt) | PP_5204 | hypothetical protein |
| ? | NC_002947 | 5935903 = | 61 (1.500) | coding (2/297 nt) | PP_5204 | hypothetical protein | |||||
AGCGCGCTTCACCCAAGCGTGCGAGGGCTTCGATGGAGAGCTCGTCGGGCTCGGATTTCATCAGCCAGTAAGCCATGAATGCTGCTCCTGAAAAGGTTTGAAATAACCTGTTGCACGAAACCGACAGCCGGTTGGCGTCAAGGTTTGCGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5936014‑5935863‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgcAACAGGTTATTTCAAACCTTTTCAGGAGCAGCATTCATGGCTTACTGGCTGATGAAATCCGAGCCCGACGAGCTCTCCATCGAAGCCCTCGCACGCTTGGGTGAAGCGCGCTGGGACGGCGTGC > NC_002947/5935903‑5936026 AGCGCGCTTCACCCAAGCGTGCGAGGGCTTCGATGGAGAGCTCGTCGGGCTCGGATTTCATCAGCCAGTAAGCCATGAATGCTGCTCCTGAAAAGGTTTGAAATAACCTGTTGCACGAAACCGACAGCCGGTTGGCGTCAAGGTTTGCG > 5:44782/1‑149AGCGCGCTTCACCCAAGCGTGCGAGGGCTTCGATGGAGAGCTCGTCGGGCTCGGATTTCATCAGCCAGTAAGCCATGAATGCTGCTCCTGAAAAGGTTTGAAATAACCTGTTGCACGAAACCGACAGCCGGTTGGCGTCAAGGTTTGCG < 6:39637/149‑1 TTTGAAATAACCTGTTGCACGAAACCGACAGCCGGTTGGCGTCAAGGTTTGCGTGCAACAGGTTATTTCAAACCTTTTCAGGAGCAGCATTCATGGCTTACTGGCTGA > 7:125615/1‑108 TTTGAAATAACCTGTTGCACGAAACCGACAGCCGGTTGGCGTCAAGGTTTGCGTGCAACAGGTTATTTCAAACCTTTTCAGGAGCAGCATTCATGGCTTACTGGCTGA < 8:125615/108‑1 TGTTGCACGAAACCGACAGCCGGTTGGCGTCAAGGTTTGCGTGCAACAGGTTATTTCAAACCTTTTCAGGAGCAGCATTCATGGCTTACTGGCTGATGAAATCCGAGCCCGACGAGCTCTCCATCGAAGCCCTCGCACGCTTGGGTG > 7:146350/1‑147 TTGCACGAAACCGACAGCCGGTTGGCGTCAAGGTTTGCGTGCAACAGGTTATTTCAAACCTTTTCAGGAGCAGCATTCATGGCTTACTGGCTGATGAAATCCGAGCCCGACGAGCTCTCCATCGAAGCCCTCGCACGCTTGGGTGAAGC > 2:153282/1‑149 ACGAAACCGACAGCCGGTTGGCGTCAAGGTTTGCGTGCAACAGGTTATTTCAAACCTTTTCAGGAGCAGCATTCATGGCTTACTGGCTGATGAAATCCGAGCCCGACGAGCTCTCCATCGAAGCCCTCGCACGCTTGGGTGAAGCGCGC > 7:25590/1‑149 ACGAAACCGACAGCCGGTTGGCGTCAAGGTTT‑CGTGCAACAGGTTATTTCAAACCTTTTCAGGAGCAGCATTCATGGCTTACTGGCTGATGAAATCCGAGCCCGACGAGCTCTCCATCGAAGCCCTCGCACGCTTGGGTGAAGCGCGCT > 3:84753/1‑149 GCCGGTTGGCGTCAAGGTTTGCGTGCAACAGGTTATTTCAAACCTTTTCAGGAGCAGCATTCATGGCTTACTGGCTGATGAAATCCGAGCCCGACGAGCTCTCCATCGAAGCCCTCGCACGCTTGGGTGAAGCGCGCTGGGACGGCGTG < 8:146350/149‑1 GCAACAGGTTATTTCAAACCTTTTCAGGAGCAGCATTCATGGCTTACTGGCTGATGAAATCCGAGCCCGACGAGCTCTCCATCGAAGCCCTCGCACGCTTGGGTGAAGCGCGCTGGGACGGCGTGC < 7:198410/126‑1 GCAACAGGTTATTTCAAACCTTTTCAGGAGCAGCATTCATGGCTTACTGGCTGATGAAATCCGAGCCCGACGAGCTCTCCATCGAAGCCCTCGCACGCTTGGGTGAAGCGCGCTGGGACGGCGTGC > 8:198410/1‑126 AGCGCGCTTCACCCAAGCGTGCGAGGGCTTCGATGGAGAGCTCGTCGGGCTCGGATTTCATCAGCCAGTAAGCCATGAATGCTGCTCCTGAAAAGGTTTGAAATAACCTGTTGCACGAAACCGACAGCCGGTTGGCGTCAAGGTTTGCGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5936014‑5935863‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgcAACAGGTTATTTCAAACCTTTTCAGGAGCAGCATTCATGGCTTACTGGCTGATGAAATCCGAGCCCGACGAGCTCTCCATCGAAGCCCTCGCACGCTTGGGTGAAGCGCGCTGGGACGGCGTGC > NC_002947/5935903‑5936026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |