| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5939964 | 63 (1.490) | 6 (0.150) | 6/250 | NT | 8.6% | coding (2525/2721 nt) | rbbA | ribosome‑associated ATPase |
| ? | NC_002947 | = 5939985 | 67 (1.640) | coding (2546/2721 nt) | rbbA | ribosome‑associated ATPase | |||||
TTTGGCATGTGGCGGCGTGGCCTACCTGCTGGCAACCACCAGCCTGGGCCTGCTGATTTCGGCATTCACCCGCACCCAGATCGCCGCCATTCTCGGCACCATGATCATTACCAGCCTGCCGACCATCCAGTTTTCCGGGCTGATCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5939815‑5939964‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccGCGC‑CGTCCAGCGACGAGCGTGGCACGATCAGCCCGGAAAACTGGATGGTCGGCAGGCTGGTAATGATCATGGTGCCGAGAATGGCGGCGATCTGGGTGCGGGTGAATGCCGAAATCAGCAGGCCCAGGCTGGTGGTTGCCAGCA < NC_002947/5939985‑5939841 TTTGGCATGTGGCGGCGTGGCCTACCTGCTGGCAACCACCAGCCTGGGCCTGCTGATTTCGGCATTCACCCGCACCCAGATCGCCGCCATTCTCGGCACCATGATCATTACCAGCCTGCCGACCATCCAGTTTTCCGGGCTGATCGTGC > 3:261535/1‑149 GCTGGCAACCACCAGCCTGGGCCTGCTGATTTCGGCATTCACCCGCACCCAGATCGCCGCCATTCTCGGCACCATGATCATTACCAGCCTGCCGACCATCCAGTTTTCCGGGCTGATCGTGCCACGC‑CGTCCAGCGACGAGCGTG > 3:219775/1‑145 GCTGGCAACCACCAGCCTGGGCCTGCTGATTTCGGCATTCACCCGCACCCAGATCGCCGCCATTCTCGGCACCATGATCATTACCAGCCTGCCGACCATCCAGTTTTCCGGGCTGATCGTGCCACGC‑CGTCCAGCGACGAGCGTG < 4:219775/145‑1 CCAGCCTGGGCCTGCTGATTTCGGCATTCACCCGCACCCAGATCGCCGCCATTCTCGGCACCATGATCATTACCAGCCTGCCGACCATCCAGTTTTCCGGGCTGATCGTGCCGCGC‑CGGCCAGCGACGAGCGTGGCACGATCAGCCCGG < 7:142674/149‑1 CCGCCATTCTCGGCACCATGATCATTACCAGCCTGCCGACCATCCAGTTTTCCGGGCTGATCGTGCCGCGC‑CGTCCAGCGACGAGCGTGGCA > 1:184058/1‑92 CCGCCATTCTCGGCACCATGATCATTACCAGCCTGCCGACCATCCAGTTTTCCGGGCTGATCGTGCCGCGC‑CGTCCAGCGACGAGCGTGGCA < 2:184058/92‑1 GGGCTGATCGTGCCACGCTCGTCGCTGGACG‑GCGCGGCACGATCAGCCCGGAAAACTGGATGGTCGGCAGGCTGGTAATGATCATGGTGCCGAGAATGGCGGCGATCTGGGTGCGGGTGAATGCCGAAATCAGCAGGCCCAGGCTGGTG > 1:106024/1‑149 TGCCGCGC‑CGTCCAGCGACGAGCGAGGCACGATCAGCCCGGAAAACTGGATGGTCGGCAGGCTGGTAATGATCATGGTGCCGAGAATGGCGGCGATCTGGGTGCGGGTGAATGCCGAAATCAGCAGGCCCAGGCTGGTGGTTGCCAG > 7:39470/1‑147 CCGCGC‑CGTCCAGCGACGAGCGTGGCACGATCAGCCCGGAAAACTGGATGGTCGGCAGGCTGGTAATGATCATGGTGCCGAGAATGGCGGCGATCTGGGTGCGGGTGAATGCCGAAATCAGCAGGCCCAGGCTGGTGGTTGCCAGCA < 1:96531/147‑1 TTTGGCATGTGGCGGCGTGGCCTACCTGCTGGCAACCACCAGCCTGGGCCTGCTGATTTCGGCATTCACCCGCACCCAGATCGCCGCCATTCTCGGCACCATGATCATTACCAGCCTGCCGACCATCCAGTTTTCCGGGCTGATCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5939815‑5939964‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccGCGC‑CGTCCAGCGACGAGCGTGGCACGATCAGCCCGGAAAACTGGATGGTCGGCAGGCTGGTAATGATCATGGTGCCGAGAATGGCGGCGATCTGGGTGCGGGTGAATGCCGAAATCAGCAGGCCCAGGCTGGTGGTTGCCAGCA < NC_002947/5939985‑5939841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |