New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 581532	39 (0.920)	4 (0.100)	4/244	NT	9.0%	coding (822/1428 nt)	selA	selenocysteine synthase
	?	NC_002947	= 581553	44 (1.100)					coding (843/1428 nt)	selA	selenocysteine synthase

TGCAGCAATTACAGCATCCAGGGCTTCACCACCCAAGTGCCTACTGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATCAAGAAAAATCCGCTC  >  NC_002947/581395‑581676                                                                                                                                          |                                                                                                                                                  tGCAGCAATTACAGCATCCAGCGCTTCACCACCCAAGTGCCTACTGCCCAGCTCGCACGTATCGCCCACCAACATGAAATACCACTGCATGAAGACCTGGGCAGCCGCAGCCTGCTCGACCATACGCGCATCGGCCAGCCC‑GCCGAAc                                                                                                                                        >  2:222106/1‑148 (MQ=255)   cagcaATTACAGCATCCAGGGCTTCACCACCCAAGTGCCTACTGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCa                                                                                                                                     <  6:146613/149‑1 (MQ=255)    agcaATTACAGCATCCAGGGCTTCACCACCCAAGTGCCTACTGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCTACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCAc                                                                                                                                    >  6:76895/1‑149 (MQ=255)           aCAGCATCCAGGGCTTCACCACCCAAGTGCCTACTGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACg                                                                                                                              <  4:143030/148‑1 (MQ=255)                         ttCACCACCCAAGTGCCTACTGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGa                                                                                                               >  7:190393/1‑149 (MQ=255)                           caccacCCAAGTGCCTACTGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGgcgtaccgtgggttcggcgggcaggccc                                                                                                                       >  1:152150‑M1/1‑112 (MQ=255)                           caccacCCAAGTGCCTACTGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGgcgtaccgtgggttcggcgggcaggccc                                                                                                                       <  2:152150‑M1/140‑29 (MQ=255)                           caccacCCAAGTGCCTACTGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATg                                                                                                             >  5:47539/1‑149 (MQ=255)                                  cAAGTGCCTACTGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGa                                                                                                      <  8:67792/149‑1 (MQ=255)                                   aaGTGCCTACTGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGa                                                                                                      >  8:190924/1‑148 (MQ=255)                                             tGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCt                                                                                           >  2:128465/1‑149 (MQ=255)                                                       gCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGTCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGa                                                                                 >  1:50197/1‑149 (MQ=255)                                                         aCGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACa                                                                               <  6:47539/149‑1 (MQ=255)                                                                gCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCGTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAActgct                                                                        <  5:76895/149‑1 (MQ=255)                                                                    tccaACATGAATTTCCACTGCTTGAAGACCTGGGCAGAGTCATCCTTCTCTACCTTACCGGCTGGGGCCTGCCC‑GCCGAAGCCACGGTACGCCAGGCGCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTggg                                                                     <  4:150064/147‑1 (MQ=255)                                                                    accaACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCATCCCA‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTACAGTGGCGACAAACTCATgggg                                                                    >  3:177620/1‑149 (MQ=255)                                                                      caACATGAATTACCACTGCTTGAAGACCTGGGCAGCTGCAGACTGCTCGACCTTACACGCTGGGGCCTGCCC‑GCCGAACCCACGCTACGCCACGCCCTGGCCCATCGTGCCGATATCGTCACCTTCAGTGGCGACAAAcagctgcg                                                                     >  3:150064/1‑144 (MQ=255)                                                                      caACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTggg                                                                     >  3:11066/1‑146 (MQ=255)                                                                      caACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCACCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTggg                                                                     <  4:11066/146‑1 (MQ=255)                                                                            gAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGACTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGTGCCGc                                                             >  3:104647/1‑148 (MQ=255)                                                                               ttACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGc                                                         >  2:142238/1‑149 (MQ=255)                                                                                  ccACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCgg                                                      >  1:129112/1‑149 (MQ=255)                                                                                   cACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCgg                                                      >  4:173545/1‑148 (MQ=255)                                                                                      tGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCa                                                            <  5:265869/139‑1 (MQ=255)                                                                                      tGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCa                                                            >  6:265869/1‑139 (MQ=255)                                                                                       gCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGgcgtaccgtgggttcggcgggc                                                                                                                             <  3:220184‑M1/74‑23 (MQ=255)                                                                                       gCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGgcgtaccgtgggttcggcgggc                                                                                                                             >  4:220184‑M1/1‑52 (MQ=255)                                                                                               aCCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGc                                         <  3:173545/149‑1 (MQ=255)                                                                                                   gggCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCCGGGCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCca                                       >  1:192170/1‑148 (MQ=255)                                                                                                              gcCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGTCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATc                          <  2:50197/149‑1 (MQ=255)                                                                                                               ccTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGa                                                                                 <  8:141485/93‑1 (MQ=255)                                                                                                               ccTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGa                                                                                 >  7:141485/1‑93 (MQ=255)                                                                                                                 tGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGa                                                    >  8:72448/1‑120 (MQ=255)                                                                                                                 tGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGa                                                    <  7:72448/120‑1 (MQ=255)                                                                                                                    tCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGa                                 <  3:115130/136‑1 (MQ=255)                                                                                                                    tCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGa                                 >  4:115130/1‑136 (MQ=255)                                                                                                                         cTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATCaa               <  7:190924/149‑1 (MQ=255)                                                                                                                          ttACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATc                 >  6:96236/1‑146 (MQ=255)                                                                                                                              ccGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATCAAGaaa           >  6:208695/1‑148 (MQ=255)                                                                                                                                    gggCCTGCCC‑GCCGAACCCACGTTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATCAAGAAAAATcc      <  8:190393/147‑1 (MQ=255)                                                                                                                                    gggCCTGCCC‑GCCGAACCCACGGTACGCcaggccccagcgggtaaggtcgagcaggctgccgctgcccaggtcttcaagcagtggtaattcatgttggtgggcgatacgtgccagctcggcagtaggcacttgggtggtg             <  2:152150‑M2/140‑113 (MQ=255)                                                                                                                                    gggCCTGCCC‑GCCGAACCCACGGTACGCcaggccccagcgggtaaggtcgagcaggctgccgctgcccaggtcttcaagcagtggtaattcatgttggtgggcgatacgtgccagctcggcagtaggcacttgggtggtg             >  1:152150‑M2/1‑28 (MQ=255)                                                                                                                                    gggCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATCAAGAAAAATcc      <  2:129112/147‑1 (MQ=255)                                                                                                                                    gggCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATCAAGAAAAATCCGc    >  5:220726/1‑149 (MQ=255)                                                                                                                                    gggCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATCAAGAAAAATCCGc    <  5:96236/149‑1 (MQ=255)                                                                                                                                      gCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATCAAGAAAAATCCGCt   >  3:264390/1‑148 (MQ=255)                                                                                                                                       ccTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTgg                                                                      <  2:128715/80‑1 (MQ=255)                                                                                                                                       ccTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTgg                                                                      >  1:128715/1‑80 (MQ=255)                                                                                                                                       ccTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAACCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATCAAGAAAAATCCGCta  >  8:46985/1‑147 (MQ=255)                                                                                                                                        cTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATCAAGAAAAATCCGCTc  >  8:34191/1‑147 (MQ=255)                                                                                                                                          gCCC‑GCCGAACCCACGGTACGCcaggccccagcgggtaaggtcgagcaggctgccgctgcccaggtcttcaagc                                                                         >  4:220184‑M2/1‑22 (MQ=255)                                                                                                                                          gCCC‑GCCGAACCCACGGTACGCcaggccccagcgggtaaggtcgagcaggctgccgctgcccaggtcttcaagc                                                                         <  3:220184‑M2/74‑53 (MQ=255)                                                                                                                                          |                                                                                                                                                  TGCAGCAATTACAGCATCCAGGGCTTCACCACCCAAGTGCCTACTGCCGAGCTGGCACGTATCGCCCACCAACATGAATTACCACTGCTTGAAGACCTGGGCAGCGGCAGCCTGCTCGACCTTACCCGCTGGGGCCTGCCC‑GCCGAACCCACGGTACGCCAGGCCCTGGCCGATGGTGCCGATATCGTCACCTTCAGTGGCGACAAACTGCTGGGGGGGCCGCAAGCCGGGATCATCGTCGGCCACAAGGACTTGATCACCAGGATCAAGAAAAATCCGCTC  >  NC_002947/581395‑581676

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.