New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	798522 =	46 (1.090)	4 (0.100)	3/242	NT	9.7%	coding (495/618 nt)	fklB‑I	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
	?	NC_002947	798611 =	31 (0.780)					coding (584/618 nt)	fklB‑I	FKBP‑type peptidyl‑prolyl cis‑trans isomerase

CCGCGAAGACAACGTGCGTACGCACTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTCGACGTCGAGCTGCTCGACGTTCTGTAATGCCCTGGAGGCCGGCCCTGCCG  >  NC_002947/798381‑798668                                                                                                                                              |                                                                                                                                                   ccGCGAAGACAACGTGCGTACGCACTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTg                                                                                                                                             >  4:224616/1‑149 (MQ=255) ccGCGAAGACAACGTGCGTACGCACTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTAATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTg                                                                                                                                             >  1:168519/1‑149 (MQ=255)  cgcgAAGACAACGGTCGTACGCACTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTCCGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTgg                                                                                                                                            <  7:215911/149‑1 (MQ=255)      aaGACAACGTGCGTACGCACTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGgcag                                                                                                                                         >  3:227832/1‑148 (MQ=255)              gTGCGTACGCACTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGgcg                                                                                                                                >  3:27811/1‑149 (MQ=255)                  gTACGCACTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTg                                                                                                                            >  2:255085/1‑149 (MQ=255)                   tACGCACTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTg                                                                                                                            >  1:190904/1‑148 (MQ=255)                    aCGCACTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTa                                                                                                                          >  6:122874/1‑149 (MQ=255)                      gCACTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACg                                                                                                                        >  4:65015/1‑149 (MQ=255)                        aCTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTg                                                                                                                      >  6:231558/1‑149 (MQ=255)                            ccACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGt                                                                                                                           >  5:236352/1‑140 (MQ=255)                            ccACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGt                                                                                                                           <  6:236352/140‑1 (MQ=255)                                 gCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAg                                                                                                             <  1:255085/149‑1 (MQ=255)                                    cccTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTg                                                                                                          <  4:27811/149‑1 (MQ=255)                                     ccTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTgg                                                                                                         >  4:78167/1‑149 (MQ=255)                                            gACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGt                                                                                                                           <  7:125542/124‑1 (MQ=255)                                            gACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGt                                                                                                                           >  8:125542/1‑124 (MQ=255)                                              cGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGgcg                                                                                                <  3:1285/149‑1 (MQ=255)                                                gCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGcc                                                                                              <  4:118569/149‑1 (MQ=255)                                                    tgtgTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTACCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAg                                                                                          >  7:167044/1‑149 (MQ=255)                                                      tgtTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTAATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAg                                                                                          <  2:168519/147‑1 (MQ=255)                                                          cGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGtt                                                                                     <  3:65015/148‑1 (MQ=255)                                                           gACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTgg                                                                                   >  6:212301/1‑149 (MQ=255)                                                             cAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGgca                                                                                 <  5:122874/149‑1 (MQ=255)                                                                   cTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTgg                                                                                   <  6:160390/141‑1 (MQ=255)                                                                   cTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTgg                                                                                   >  5:160390/1‑141 (MQ=255)                                                                   cTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATcc                                                                           >  3:141254/1‑149 (MQ=255)                                                                   cTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATcc                                                                           >  2:66048/1‑149 (MQ=255)                                                                            tGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGgcag                                                                                <  6:214088/135‑1 (MQ=255)                                                                            tGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGgcag                                                                                >  5:214088/1‑135 (MQ=255)                                                                            tGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGcaca                                                                  <  4:227832/149‑1 (MQ=255)                                                                                    cggcagggccggccgccatgccagacccgaacgtcgagcagctcgacgtcgaacaccaCCACGCTGGCAGCAAATGGCGCCTGTACCTGCCAAGCGAGCTGGCTTACGGCGCCCACGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTg                                                          >  4:173315‑M1/59‑149 (MQ=255)                                                                                    cGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTg                                                          <  8:167044/149‑1 (MQ=255)                                                                                    cGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTg                                                          <  1:66048/149‑1 (MQ=255)                                                                                    cGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTg                                                          <  5:231558/149‑1 (MQ=255)                                                                                     ggcagggccggcctccagggcattacagaacgtcgagcagctcgacgtcgaacaccaGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTgg                                                         >  7:167523‑M1/58‑149 (MQ=255)                                                                                           aTTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGGCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTc                                                    <  2:190904/148‑1 (MQ=255)                                                                                           aTTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTc                                                    <  4:141254/148‑1 (MQ=255)                                                                                           aTTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTc                                                    >  2:184370/1‑148 (MQ=255)                                                                                                cGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTCGACGTc                                              >  5:198146/1‑149 (MQ=255)                                                                                                 ggTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTCGACGTCg                                             <  3:78167/149‑1 (MQ=255)                                                                                                     ggcggcGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTCGACGTCGAgc                                          <  5:212301/148‑1 (MQ=255)                                                                                                     agggcattacagaacgtcgagcagctcgacgtcgaacaccaGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAACATCCCGCCGCACAGCGTTCTgg                                                         <  1:162760‑M1/92‑1 (MQ=255)                                                                                                     agggcattacagaacgtcgagcagctcgacgtcgaacaccaGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAACATCCCGCCGCACAGCGTTCTgg                                                         >  2:162760‑M1/42‑133 (MQ=255)                                                                                                             gATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGgt                                                        >  5:23115/1‑126 (MQ=255)                                                                                                             gATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGgt                                                        <  6:23115/126‑1 (MQ=255)                                                                                                              aTCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTCGACGTCGAGCTGCTCGACg                                 <  8:2958/148‑1 (MQ=255)                                                                                                                           ccGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTCGACGTCGAGCTGCTCGACg                                 >  7:113524/1‑135 (MQ=255)                                                                                                                           ccGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTCGACGTCGAGCTGCTCGACg                                 <  8:113524/135‑1 (MQ=255)                                                                                                                            cGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTCGACGTCGAGCTGCTCGACGTTCTGTAATGCCCTg                  >  4:49365/1‑149 (MQ=255)                                                                                                                                           gatgaACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTCGACGTCGAGCTGCTCGACGTTCTGTAATGCCCTGGAGGCCGGCCCTGcc   >  4:205857/1‑149 (MQ=255)                                                                                                                                            atgaACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTCGACGTCGAGCTGCTCGACGTTCTGTAATGCCCTGGAGGCCGGCCCTGCCg  >  2:4344/1‑149 (MQ=255)                                                                                                                                              |                                                                                                                                                   CCGCGAAGACAACGTGCGTACGCACTACCACGGCACCCTGATCGACGGCACTGTGTTCGACAGCTCCTACGAGCGTGGCCAGCCGGCTGAATTCCCGGTAGGCGGCGTGATCGCTGGCTGGACCGAAGCCCTGCAGCTGATGAACGCTGGCAGCAAATGGCGCCTGTACGTGCCAAGCGAGCTGGCTTACGGCGCCCAAGGCGTTGGCAGCATCCCGCCGCACAGCGTTCTGGTGTTCGACGTCGAGCTGCTCGACGTTCTGTAATGCCCTGGAGGCCGGCCCTGCCG  >  NC_002947/798381‑798668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.