New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1240791 =	41 (0.970)	3 (0.070)	3/248	NT	7.7%	coding (1392/2109 nt)	PP_1080	molybdopterin‑binding oxidoreductase
	?	NC_002947	1240843 =	33 (0.810)					coding (1444/2109 nt)	PP_1080	molybdopterin‑binding oxidoreductase

TGCTCAGTATCGATCTCTACATCAACGAAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAGCCGACCTGGTCGCCTGCGCAGATGATTGATCAAGCCCTGCGCA  >  NC_002947/1240643‑1240921                                                                                                                                                     |                                                                                                                                   tGCTCAGTATCGATCTCTACATCAACGAAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTg                                                                                                                                    <  4:112522/149‑1 (MQ=255) gcccgtgcgggtgatcgtccagtgttgccagggagagccgccagggcgttgcttcaccatagcgccctttgcgcagggcttgatcaatcatctgcgcaggcgaccaggtcggcttcaacgccaactcggcacgcttggcaaacgcctgg                                                                                                                                    <  1:33886‑M1/1‑1 (MQ=255) gcccgtgcgggtgatcgtccagtgttgccagggagagccgccagggcgttgcttcaccatagcgccctttgcgcagggcttgatcaatcatctgcgcaggcgaccaggtcggcttcaacgccaactcggcacgcttggcaaacgcctgg                                                                                                                                    >  2:155540‑M1/149‑149 (MQ=255)   ccgtgcgggtgatcgtccagtgttgccagggagagccgccagggcgttgcttcaccatagcgccctttgcgcagggcttgatcaatcatctgcgcaggcgaccaggtcggcttcaacgccaactcggcacgcttggcaaacgcctgGGc                                                                                                                                  >  6:224358‑M1/147‑149 (MQ=255)      aGTATCGATCTCTACATCAACGAAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCaa                                                                                                                               <  5:153622/149‑1 (MQ=255)      aGTATCGATCTCTACATCAACGAAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCaa                                                                                                                               <  3:180594/149‑1 (MQ=255)          tCGATCTCTACATCAACGAAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCg                                                                                                                           <  8:50466/149‑1 (MQ=255)                 ctACATCAACGCAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAggggg                                                                                                                    >  6:110454/1‑149 (MQ=255)                  tACATCAACGAAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTTACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAgg                                                                                                                       <  3:138266/145‑1 (MQ=255)                  tACATCAACGAAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAgg                                                                                                                       <  1:130526/145‑1 (MQ=255)                     aTCAACGAAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGcc                                                                                                                                 >  8:240426/1‑132 (MQ=255)                     aTCAACGAAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGcc                                                                                                                                 <  7:240426/132‑1 (MQ=255)                        aaCGAAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCa                                                                                                             >  6:250431/1‑149 (MQ=255)                            aaaCCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGAc                                                                                                         <  1:109173/149‑1 (MQ=255)                            aaaCCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGAc                                                                                                         >  7:84476/1‑149 (MQ=255)                            aaaCCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGCGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGAc                                                                                                         <  7:116295/149‑1 (MQ=255)                                        aTGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTtc                                                                                             <  4:107228/149‑1 (MQ=255)                                             gACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCgg                                                                                        <  5:112610/149‑1 (MQ=255)                                             gACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCgg                                                                                        >  4:49750/1‑149 (MQ=255)                                                   aTCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGc                                                                                  >  8:136460/1‑149 (MQ=255)                                                    cttcaccatagcgccctttgcgcagggcttgatcaatcatctgcgcaggcgaccaggtcggcttcaacgccaactcggcacgcttggcaaacgcctgGGCCAAGCCGGAGGGTGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGc                                                                                  >  2:33886‑M1/98‑148 (MQ=255)                                                     ttcaccatagcgccctttgcgcagggcttgatcaatcatctgcgcaggcgaccaggtcggcttcaacgccaactcggcacgcttggcaaacgcctgGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGcc                                                                                 <  3:254151‑M1/52‑1 (MQ=255)                                                     ccTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGcc                                                                                 >  6:237301/1‑148 (MQ=255)                                                       tGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAg                                                                              >  4:23645/1‑149 (MQ=255)                                                       caccatatcgccctttgcggagggcttgatcaatcatctgcggaggcgaccaggtcggcttcaacgccaactcgggacgcttggcaaacgcctgGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGcc                                                                                 >  4:254151‑M1/95‑146 (MQ=255)                                                              cACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTg                                                                       <  3:49750/149‑1 (MQ=255)                                                                 cTCAGCGCTGGAGAGCGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGcc                                                                     >  7:228448/1‑148 (MQ=255)                                                                  tCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGcc                                                                                      <  5:244777/130‑1 (MQ=255)                                                                  tCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGcc                                                                                      >  6:244777/1‑130 (MQ=255)                                                                    aGCGCTGGAGAGCGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGc                                                                 <  8:228448/149‑1 (MQ=255)                                                                                cGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGa                                                          <  8:199186/144‑1 (MQ=255)                                                                                cGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGa                                                          <  8:202826/144‑1 (MQ=255)                                                                                cGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGa                                                          >  7:202826/1‑144 (MQ=255)                                                                                cGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGa                                                          >  7:199186/1‑144 (MQ=255)                                                                                   ccATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGt                                                  >  5:123080/1‑149 (MQ=255)                                                                                   ccATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGt                                                  <  7:136460/149‑1 (MQ=255)                                                                                    cATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGtt                                                 <  3:23645/149‑1 (MQ=255)                                                                                        aCGTCAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGaa                                              <  5:2008/148‑1 (MQ=255)                                                                                        aCGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGaa                                              <  1:269637/148‑1 (MQ=255)                                                                                            cAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAGCCGa                                         >  1:55876/1‑149 (MQ=255)                                                                                                     cAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAGCCGACCTGGTc                                  <  5:250431/147‑1 (MQ=255)                                                                                                               gCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAGCCGACCTGGTCGCCTGCGCAga                       <  5:237301/148‑1 (MQ=255)                                                                                                                     cgcAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAGCCGACCTGGTCGCCTGCGCAGAtgattga                >  3:242426/1‑149 (MQ=255)                                                                                                                      gcAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAGCCGACCTGGTCGCCTGCGCAGAtgattgat               >  7:90931/1‑149 (MQ=255)                                                                                                                                gcgcTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAGCCGACCTGGTCGCCTGCGCAGATGATTGATCAAGCCCTgc     <  2:55876/149‑1 (MQ=255)                                                                                                                                  gcTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGTCGTTTGCCAAGCGTGCCGAGTTGGAGTTGAAGCCGACCTGGTCGACTGCGCAGATGATTGATCAAGCCCTgcg    >  4:245529/1‑148 (MQ=255)                                                                                                                                    ttCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAGCCGACCTGGTCGCCTGCGCAGATGATTGATCAAGCCCTGCGCa  >  3:22606/1‑148 (MQ=255)                                                                                                                                     tCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAGCCGACCTGGTCGCCTGCGCAGATGATTGATCAAGCCCTGCGCa  >  5:218528/1‑147 (MQ=255)                                                                                                                                         ccGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAg                                             <  1:200385/100‑1 (MQ=255)                                                                                                                                         ccGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAg                                             >  2:200385/1‑100 (MQ=255)                                                                                                                                                     |                                                                                                                                   TGCTCAGTATCGATCTCTACATCAACGAAACCACCCGCCATGCCGACTTGATCCTGCCCTCCACCTCAGCGCTGGAGAACGACCATTACGACAGCACCTTCAACTTGCTGGCAGTGCGCAATGTCACGCGCTTCAACCGGGCGATCCTGGCCAAGCCGGAGGGGGCACTGCATGACTGGGAGATCTTCGTCGGCCTGGCCCAGGCGTTTGCCAAGCGTGCCGAGTTGGCGTTGAAGCCGACCTGGTCGCCTGCGCAGATGATTGATCAAGCCCTGCGCA  >  NC_002947/1240643‑1240921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.