New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3084350 =37 (0.880)3 (0.080) 3/242 NT 8.0% coding (760/987 nt) PP_2693 putative Dipeptidase
?NC_002947 3084386 = 34 (0.860)coding (724/987 nt) PP_2693 putative Dipeptidase

GCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTCCGAGGCACCCTTGAGGTGGAACGGATAGGTGCTGAAG  >  NC_002947/3084204‑3084498
                                                                                                                                                  |                                                                                                                                                    
gCCGCGGGCGCGCAGGTCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCa                                                                                                                                                    >  6:183902/1‑149 (MQ=255)
gCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAgta                                                                                                                                                    >  8:38127/1‑147 (MQ=255)
    gggatcgcagagtccggcgggctgctgggcttcagcacctatccgttccacctcaagggtgcctcggactgtagcctggaaagtttctgcgacatggtcgcgcgcaccgccgacctgatgggtgtggagcatatcggcatcgGCACCGa                                                                                                                                                <  5:31671‑M1/7‑1 (MQ=255)
     gggCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGAc                                                                                                                                               <  3:41613/149‑1 (MQ=255)
       gcgcgcAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACaa                                                                                                                                             <  4:132006/149‑1 (MQ=255)
         gcgcAGGTCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAgg                                                                                                                                           <  5:183902/149‑1 (MQ=255)
         gcgcAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGTACCGACAAgg                                                                                                                                           <  7:38127/149‑1 (MQ=255)
             aGGCCCTGGGCGAGGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTg                                                                                                                                       <  4:63644/149‑1 (MQ=255)
                              gaggAGGTCGAGTCTGTCGAGGAACCACTGCAAGGTCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCTCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACAGACAAGGGTTGCGCCTGGCACAGGTCg                                                                                                                       <  8:189939/146‑1 (MQ=255)
                                  aGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGtt                                                                                                                                        >  2:104092/1‑127 (MQ=255)
                                  aGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGtt                                                                                                                                        <  1:104092/127‑1 (MQ=255)
                                     agcacctatccgttccacctcaagggtgcctcggactgtagcctggaaagtttctgcgacatggtcgcgcgcaccgccgacctgatgggtgtggagcatatcggcatcgGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGtgccga                                                                                                                >  8:203111‑M1/110‑148 (MQ=255)
                                         ggCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGtgacgatgcc                                                                                                            >  8:182991/1‑148 (MQ=255)
                                           cTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTgccgatgccgat                                                                                                         <  7:182991/149‑1 (MQ=255)
                                                 cgGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTc                                                                                                   >  8:204518/1‑149 (MQ=255)
                                                        tcaagggtgcctcggactgtagcctggaaagtttctgcgacatggtcgcgcgcaccgccgacctgatgggtgtggagcatatcggcatcgGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGtg                                                                                                                    <  3:162917‑M1/35‑1 (MQ=255)
                                                        tcaagggtgcctcggactgtagcctggaaagtttctgcgacatggtcgcgcgcaccgccgacctgatgggtgtggagcatatcggcatcgGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGtg                                                                                                                    >  4:162917‑M1/91‑125 (MQ=255)
                                                          tGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTc                                                                                                   <  4:121433/140‑1 (MQ=255)
                                                          tGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTc                                                                                                   >  3:121433/1‑140 (MQ=255)
                                                               gggCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGt                                                                                     >  4:198384/1‑149 (MQ=255)
                                                                      ggCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGt                                                                              >  6:206926/1‑149 (MQ=255)
                                                                      ggCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGt                                                                              <  5:49770/149‑1 (MQ=255)
                                                                      gactgtagcctggaaagtttctgcgacatggtcgcgcgcaccgccgacctgatgggtgtggagcatatcggcatcgGCACCGAc                                                                                                                                               >  1:250749‑M1/77‑84 (MQ=255)
                                                                      gactgtagcctggaaagtttctgcgacatggtcgcgcgcaccgccgacctgatgggtgtggagcatatcggcatcgGCACCGAc                                                                                                                                               <  2:250749‑M1/8‑1 (MQ=255)
                                                                       gCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGtgccgatgccg                                                                                                           >  8:117710/1‑119 (MQ=255)
                                                                       gCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGtgccgatgccg                                                                                                           <  7:117710/119‑1 (MQ=255)
                                                                                       ccTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCg                                                              >  4:6976/1‑148 (MQ=255)
                                                                                                ttCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACttt                                                    >  7:136267/1‑149 (MQ=255)
                                                                                                  cGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACttt                                                    <  5:206926/147‑1 (MQ=255)
                                                                                                      gTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGc                                              >  7:253360/1‑149 (MQ=255)
                                                                                                       tAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGc                                              >  1:76077/1‑148 (MQ=255)
                                                                                                       tAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACCTTCCAGGc                                              >  2:253434/1‑148 (MQ=255)
                                                                                                                tccttgCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTcc                                      >  3:256617/1‑147 (MQ=255)
                                                                                                                  cttgCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGc                                                             <  6:73514/122‑1 (MQ=255)
                                                                                                                  cttgCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGc                                                             >  5:73514/1‑122 (MQ=255)
                                                                                                                  cttgCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTc                                                   >  8:253087/1‑132 (MQ=255)
                                                                                                                  cttgCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTc                                                   <  7:253087/132‑1 (MQ=255)
                                                                                                                       tCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTCCGAGGCAccc                             >  6:31671/1‑149 (MQ=255)
                                                                                                                             ggCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTCCGAGGCACCCTTGAgg                       <  7:204518/149‑1 (MQ=255)
                                                                                                                                    gcgcATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTCCGAGGCACCCTTGAGGTGGAAc                 <  8:136267/148‑1 (MQ=255)
                                                                                                                                     cgcATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTCCGAGGCACCCTTGAGGTGGAACg                <  3:6976/148‑1 (MQ=255)
                                                                                                                                           cATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTCCGAGGCAccc                             <  5:26445/129‑1 (MQ=255)
                                                                                                                                           cATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTCCGAGGCAccc                             >  6:26445/1‑129 (MQ=255)
                                                                                                                                            aTTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACAccc                                                                                            <  3:195530/65‑1 (MQ=255)
                                                                                                                                            aTTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACAccc                                                                                            >  4:195530/1‑65 (MQ=255)
                                                                                                                                             ttCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTCCGAGGCACCCTTGAGGTGGAACGGATAGGTGc       >  3:61748/1‑149 (MQ=255)
                                                                                                                                               ccAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTCCGAGGCACCCTTGAGGTGGAACGGATAGGTGCt      <  6:253996/148‑1 (MQ=255)
                                                                                                                                                  GCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTCCGAGGCACCCTTGAGGTGGAACGGATAGGTGCTGAAg  >  2:76077‑M1/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GCCGCGGGCGCGCAGGCCCTGGGCGATGTTGCGGAGGTCGCGGCTGTCGCGGAACCACTGCAAGGGCGCCGGCCAGTTGGCGTTGTCCCTGGAGCCTTCGCCGTAGTCCTTGTCCTTGCTCCAGCGGCCGTTGCGCATCCATTCCAGCACCGACAAGGGTTGCGCCTGGCACAGGTCGGTGCCGATGCCGATATGCTCCACACCCATCAGGTCGGCGGTGCGCGCGACCATGTCGCAGAAACTTTCCAGGCTACAGTCCGAGGCACCCTTGAGGTGGAACGGATAGGTGCTGAAG  >  NC_002947/3084204‑3084498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.