| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4165585 | 35 (0.830) | 4 (0.100) | 4/248 | NT | 9.6% | coding (517/1335 nt) | PP_3666 | MHS family metabolite MFS transporter |
| ? | NC_002947 | = 4165655 | 42 (1.040) | coding (447/1335 nt) | PP_3666 | MHS family metabolite MFS transporter | |||||
TGCAAGCTCATGCGGATATAGCGCCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACA > NC_002947/4165437‑4165731 | tGCAAGCTCATGCGGATATAGCGCCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGC > 7:181013‑M1/1‑149 (MQ=255) aaGCTCATGCGGATATAGCGCCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGt > 7:85732/1‑149 (MQ=255) gCTCATGCGGATATAGCGCCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGc < 6:257526/149‑1 (MQ=255) tGCGGATATAGCGCCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGcc > 3:172334/1‑149 (MQ=255) aGCGCCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGc > 8:15767/1‑143 (MQ=255) aGCGCCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGc < 7:15767/143‑1 (MQ=255) aGCGCCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGc > 6:25961/1‑143 (MQ=255) aGCGCCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGc < 5:25961/143‑1 (MQ=255) aGCGCCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATg > 5:174718/1‑149 (MQ=255) gcCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTg < 6:119207/149‑1 (MQ=255) tACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGgtg > 6:118585/1‑148 (MQ=255) ccGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGcc < 4:172334/149‑1 (MQ=255) aCGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCtgcgttcctggccgagtacgcgccgcctgggcggcgt > 1:166001‑M1/1‑112 (MQ=255) ccgccAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCa < 8:181013/149‑1 (MQ=255) cagcagGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCtgcgttcctggccgagtacgcgccgcctgggcggcgtggcttgtaca > 2:180911‑M1/1‑102 (MQ=255) aGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGc < 6:158064/149‑1 (MQ=255) gcgcCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGc > 1:172798/1‑96 (MQ=255) gcgcCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGc < 2:172798/96‑1 (MQ=255) cccACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCa < 6:174718/149‑1 (MQ=255) cACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTa > 1:184580/1‑131 (MQ=255) cACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTa < 2:184580/131‑1 (MQ=255) cTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCtgcgttcctggccgagtacgcgccgcctgggcggcgtggcttgtacaccagcatcgtgccggccagcacggcgg < 2:166001‑M1/149‑75 (MQ=255) aTGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCtgcgttcctggccgagtccgcgccgcctgggcggcgtggcttgtacaccagcatcgtgccggccagcacggcggcgg < 1:180911‑M1/149‑78 (MQ=255) gCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTa > 3:143544/1‑149 (MQ=255) gCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTa > 7:28089/1‑149 (MQ=255) cACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTc < 5:118585/148‑1 (MQ=255) tgctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCAccc > 7:30616/1‑149 (MQ=255) tgctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCAccc > 1:179020/1‑149 (MQ=255) ctgAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGa < 8:85732/149‑1 (MQ=255) cagcTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCg > 3:94180/1‑148 (MQ=255) cagcTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCAGGCCGGCACGCTGCTGGTGTACAAGCCCCGCCGCCCAGGCGGCGCGTACGCGGCCAGGAACGCAGCGGCCCCGGCGTACACACCCGAGGCg > 5:70093/1‑148 (MQ=255) cTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGaa > 6:121892/1‑148 (MQ=255) tGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAAccc > 5:197524/1‑149 (MQ=255) cgcgACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCa < 2:179020/149‑1 (MQ=255) acgaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCg > 8:28861/1‑149 (MQ=255) acgaACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCg < 8:30616/149‑1 (MQ=255) cgccgcACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATca < 7:28861/149‑1 (MQ=255) aacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCgg > 3:77950/1‑149 (MQ=255) aacCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCgg > 2:252706/1‑149 (MQ=255) ccccGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTg < 6:197524/149‑1 (MQ=255) ccgccgccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAggagctcgg > 7:41647/1‑141 (MQ=255) ccgccgccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAg < 8:41647/140‑1 (MQ=255) ccgccgccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGGACTCGGCCAGGAACGCAgcggcggggttgttgttcggtgcggcgttcgtcgcggtgctgcatgagctgctcagcagtgaagccctgcat < 1:180911‑M2/149‑73 (MQ=255) ccgccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAgcggcggggttgttgttcggtgcggcgttcgtcgcggtgctgcatgagctgctcagcagtgaagccctgcatgag < 2:166001‑M2/149‑76 (MQ=255) ccgccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCca > 6:39543/1‑148 (MQ=255) cgccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCAccc < 2:62280/94‑1 (MQ=255) cgccgTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCcaca < 5:121892/149‑1 (MQ=255) | TGCAAGCTCATGCGGATATAGCGCCCTACCAGGCCGAACGGCGCCGCCAGCAGGAACGGCAGGCGCCAGCCCCACTCATGCAGGGCTTCACTGCTGAGCAGCTCATGCAGCACCGCGACGAACGCCGCACCGAACAACAACCCCGCCGCCGTGCTGGCCGGCACGATGCTGGTGTACAAGCCACGCCGCCCAGGCGGCGCGTACTCGGCCAGGAACGCAGCGGCCCCGGCGTACTCACCCGAGGCGGAAAACCCCTGTACCAGGCGGATCAGCAACAGCAAGGCCGGTGCCCACA > NC_002947/4165437‑4165731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |