New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5678672 = | 52 (1.230) | 3 (0.070) | 3/250 | NT | 5.5% | coding (298/1407 nt) | bioA | adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA |
? | NC_002947 | 5678717 = | 53 (1.300) | coding (343/1407 nt) | bioA | adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA |
GGTGAGCAGCTGGTGGGTCAACGTGTTCGGCCATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGACAAGAAGCGCTTCGTCACCCTGACCAA > NC_002947/5678530‑5678814 | ggTGAGCAGCTGGTGGGTCAACGTGTTCGGCCATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCa < 1:221201/149‑1 (MQ=255) agcagcTGGTGTGTCATCGTTTTCGGCCTTGCCAACCCGCGGATGAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGTGCTCGTGA‑TCCTGTCCGGTTTCAGTCATCTGCCAGTGTTGGAGCTGTCCGAACGGCTGGTCTGCATGa < 4:194849/148‑1 (MQ=255) agcagcTGGTGGGTCAACGTGTTCGGCCATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGa < 1:138824/148‑1 (MQ=255) tCAACGTGTTCGGCCATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGtctc < 1:250431/149‑1 (MQ=255) aaCGTGTTCGGCCATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGa > 4:147012/1‑149 (MQ=255) tgtTCGGCCATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCgg < 2:99387/149‑1 (MQ=255) tgtTCGGCCATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCgg < 2:149177/149‑1 (MQ=255) gtTCGGCCATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCggg > 2:161964/1‑149 (MQ=255) ggCCATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑tt > 7:207396/1‑149 (MQ=255) gCCATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTc < 8:152264/149‑1 (MQ=255) cATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTa < 8:207396/149‑1 (MQ=255) gCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGc > 8:22168/1‑149 (MQ=255) tggtagctgttggtcagggtgacgaagcgcttcttgtccggtttgccgatgttctgccagtagtggaagctcattttcagcgccacttcgatgcacgacgagccattGt < 4:52024‑M1/2‑1 (MQ=255) tggtagctgttggtcagggtgacgaagcgcttcttgtccggtttgccgatgttctgccagtagtggaagctcattttcagcgccacttcgatgcacgacgagccattGt > 3:52024‑M1/108‑109 (MQ=255) cgcgCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAAt > 2:63754/1‑149 (MQ=255) aTCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGATTCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCt > 1:60214/1‑149 (MQ=255) tcagggtgacgaagcgcttcttgtccggtttgccgatgttctgccagtagtggaagctcattttcagcgccacttcgatgcacgacgagccattGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCtcgt > 5:49541‑M1/95‑149 (MQ=255) aaCCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCtcgtc < 3:147012/149‑1 (MQ=255) aaCCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCtcgtc > 8:85793/1‑149 (MQ=255) ccAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTcgtcgt < 2:60214/149‑1 (MQ=255) aGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTg > 6:55132/1‑149 (MQ=255) aGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCt > 2:135406/1‑148 (MQ=255) ggTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTg > 2:34149/1‑148 (MQ=255) gACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑At > 2:12171/1‑149 (MQ=255) aCCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑At < 2:206551/148‑1 (MQ=255) ccAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGa < 7:85793/149‑1 (MQ=255) ccAGCTCGAGCACGTGA‑TCCTGGCCGGTCTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGa < 8:220613/149‑1 (MQ=255) cAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTGCTTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGa < 1:63754/149‑1 (MQ=255) cAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAg > 5:209341/1‑149 (MQ=255) ccgatgttctgccagtagtggaagctcattttcagcgccacttcgatgcacgacgagccattGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGa > 5:233028‑M1/63‑106 (MQ=255) ccgatgttctgccagtagtggaagctcattttcagcgccacttcgatgcacgacgagccattGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGa < 6:233028‑M1/44‑1 (MQ=255) cGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTc > 4:180908/1‑148 (MQ=255) gAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTcc < 1:34149/148‑1 (MQ=255) gCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCac > 5:58700/1‑148 (MQ=255) a‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGc < 2:27439/148‑1 (MQ=255) a‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGc < 2:23415/148‑1 (MQ=255) tCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAg < 3:180908/149‑1 (MQ=255) ccTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCATGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAg > 5:219118/1‑148 (MQ=255) gCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACAt > 3:66284/1‑149 (MQ=255) gCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACAt < 7:22168/149‑1 (MQ=255) ccGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATc < 2:199288/149‑1 (MQ=255) ccGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGGCTCGACCGGGTG‑GTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATc < 1:271084/149‑1 (MQ=255) cGGTTTCAGTCATCAGCCAGTTATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGAAAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAACATGAGCTTCCACTACTGGCAGAACAtt < 1:12171/149‑2 (MQ=255) tttCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGc > 8:95050/1‑148 (MQ=255) aGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCAGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAAcc > 1:81199/1‑149 (MQ=255) tcatcaGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCg > 5:139894/1‑148 (MQ=255) tcaGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGAc > 8:199009/1‑148 (MQ=255) tcaGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGAc > 1:121626/1‑148 (MQ=255) aGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGAAAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGACAAGAAgc < 7:110740/149‑1 (MQ=255) gTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGACAAGAAgcg < 4:66284/149‑1 (MQ=255) tCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGACAAGAAGCGCTTc < 6:199294/149‑1 (MQ=255) cGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGACaagaa > 7:199230/1‑141 (MQ=255) cGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGACaagaa < 8:199230/141‑1 (MQ=255) aGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGACAAGAAGCGCTTCGt > 5:276142/1‑148 (MQ=255) aGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGACAAGAAGCGCTTCGt > 1:111374/1‑148 (MQ=255) tCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGACAAGAAGCGCTTCGTCAcc < 2:121626/147‑1 (MQ=255) cGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGACAAGAAGCGCTTCGTCACCCTGACCaa < 7:199009/149‑1 (MQ=255) ggTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATc < 4:36680/106‑1 (MQ=255) ggTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATc > 3:36680/1‑106 (MQ=255) | GGTGAGCAGCTGGTGGGTCAACGTGTTCGGCCATGCCAACCCGCGCATCAACCAGCGCATCAAGGACCAGGTTGACCAGCTCGAGCACGTGA‑TCCTGGCCGGTTTCAGTCATCAGCCAGTGATCGAGCTGTCCGAACGCCTGGTCGCCATGACCCCGGCCGGTCTCGACCGGGTG‑TTCTATGCCGACAATGGCTCGTCGTGCATCGAAGTGGCGCTGAAA‑ATGAGCTTCCACTACTGGCAGAACATCGGCAAACCGGACAAGAAGCGCTTCGTCACCCTGACCAA > NC_002947/5678530‑5678814 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |