| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 201181 | 47 (1.110) | 4 (0.100) | 4/244 | NT | 8.0% | coding (6687/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | = 201207 | 48 (1.200) | coding (6713/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
CACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACT‑GTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGA > NC_002947/201062‑201351 | cACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACT‑GTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGTACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGcgg < 4:137096‑M2/149‑4 (MQ=255) tCGGAGCTGTACTTCAAGCTGACCGACGGAACCACT‑GTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGcggcgc > 8:211734‑M2/1‑143 (MQ=255) tGTACTTCAAGCTGACCGACGGCACCACTGGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGc > 1:24531/1‑149 (MQ=255) tACTTCAAGCTGACCGACGGCACCACT‑GTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGt < 6:249503/148‑1 (MQ=255) ttCAAGCTGACCGACGGCACCACT‑GTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTgg > 8:2837/1‑147 (MQ=255) tCAAGCTGACCGACGGCACCACT‑GTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGAAGCCGTCAGCGGCGCAGATGCGTGGAAg > 3:22896/1‑149 (MQ=255) ccGACGGCACCACT‑GTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGTTGGTCAATGCCATCGACGCCTTCAGCGGCGCAGATGCGTGGAAGTTCGAAaac < 4:140874/149‑1 (MQ=255) ccacT‑GTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAaacctgaacctg < 5:200464/149‑1 (MQ=255) cacT‑GTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAaacctgaacctg > 1:104936/1‑148 (MQ=255) gtGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACATGAACCTGGACAAGAcccc > 2:183825/1‑149 (MQ=255) tGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGAt > 8:61031/1‑110 (MQ=255) tGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGAt < 7:61031/110‑1 (MQ=255) tGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCg < 1:183825/149‑1 (MQ=255) gCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAg < 4:212755/149‑1 (MQ=255) gCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTAcc < 2:24531/149‑1 (MQ=255) caccacGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGc > 6:164989/1‑99 (MQ=255) caccacGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGc < 5:164989/99‑1 (MQ=255) ccacGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGt > 2:31550/1‑148 (MQ=255) ccacGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTc > 2:35589/1‑149 (MQ=255) cacGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCa > 3:65271/1‑149 (MQ=255) cacGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCa < 2:104936/149‑1 (MQ=255) acGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCAc < 3:72967/149‑1 (MQ=255) cGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACt < 1:141949/149‑1 (MQ=255) tCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGAc > 8:129007/1‑147 (MQ=255) tCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGAc > 3:76908/1‑147 (MQ=255) ggCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGc > 6:166929/1‑149 (MQ=255) ccACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCa < 7:2837/149‑1 (MQ=255) aCTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGCTGCGTGGAAGTTCGAAAACCTGACCATGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAgg > 3:146103/1‑149 (MQ=255) gCACCATACAACGTCTATGTCGGCACTATTGCGCCGGTTGTCAATGCCATCGAGGCCGTCAGCGGCGCTGATGCGTGGAAGTGCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAgg < 4:146103/149‑1 (MQ=14) gCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGAccc < 5:163121/109‑1 (MQ=40) gCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGAccc > 6:163121/1‑109 (MQ=40) cACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAgg > 3:205180/1‑148 (MQ=40) cACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGc < 4:22896/149‑1 (MQ=40) ccAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCaa < 4:65271/149‑1 (MQ=39) aGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCg < 5:179811/106‑1 (MQ=40) aGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCg > 6:179811/1‑106 (MQ=40) gACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACg > 7:108032/1‑148 (MQ=37) gTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGa < 7:129007/149‑1 (MQ=37) aTGTCGGCACTAATGCGCCCGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGAGGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATc > 4:10170/1‑149 (MQ=255) tCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGt > 7:23314/1‑148 (MQ=37) ggCACTAATGCGCCGGTGGTCACTGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTc > 7:39657/1‑147 (MQ=37) gCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAg > 5:264949/1‑149 (MQ=37) aCTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGcggcgcattagtgccgacatagacgttgtctggtgcggttgcagtggccgagcccgtggtgctgttggctgccacgacgacagtggtgccgtcggtca < 1:102960‑M2/136‑99 (MQ=255) aCTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGcggcgcattagtgccgacatagacgttgtctggtgcggttgcagtggccgagcccgtggtgctgttggctgccacgacgacagtggtgccgtcggtca > 2:102960‑M2/1‑38 (MQ=255) aCTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGt < 6:264949/149‑1 (MQ=37) tAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAgg > 3:179928/1‑114 (MQ=37) aaCGCGCCGGTGGTCAATGCCATCGACGCGGTCAGcggcgcgttggtgccgacatagacgttgtctggtgcggttgcagtggccgaaccggtggtgctgttggc > 4:24464‑M2/1‑35 (MQ=255) aTGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCAc > 3:240552/1‑148 (MQ=33) gcgcCGGTGGTCAATGCCATCGACGCGGTCAGcggcgcgttggtgccgacatagacgttgtctggtgcggttgcagtggccgaaccggtggtgctgttggctgccacgacgacggtggtgccgtcggtcagcttgaagtacagctcc < 6:166621‑M2/147‑116 (MQ=255) cGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACg > 3:264196/1‑149 (MQ=32) gtggtCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGc > 1:238361/1‑149 (MQ=32) tggtCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGcc < 5:166929/149‑1 (MQ=32) tctaTGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGAc > 8:34963/4‑149 (MQ=17) ccATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACAGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGAcc > 2:267073/1‑149 (MQ=17) tCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAg < 7:157966/122‑1 (MQ=32) tCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAg > 8:157966/1‑122 (MQ=32) cgtcGCCGTCATCGGCGCAGATGCGTTGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCTGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCg < 2:238361/145‑1 (MQ=255) cGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAg < 7:34963/149‑1 (MQ=34) gCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGc > 5:73708/1‑149 (MQ=34) gTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGcc > 1:83395/1‑147 (MQ=32) gTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCga < 7:198864/149‑1 (MQ=32) gTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCga < 8:39657/149‑1 (MQ=32) | CACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACT‑GTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACTACCGTCACTGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTAGCCGA > NC_002947/201062‑201351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |