New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1412122	39 (0.920)	3 (0.080)	3/244	NT	7.4%	coding (66/240 nt)	tusA‑I	sulfurtransferase
	?	NC_002947	= 1412154	38 (0.950)					coding (98/240 nt)	tusA‑I	sulfurtransferase

CTAGCCAGCCATGCCAAGAAGCAGCCTGGCGATGCCTTTGGAGACCCCGCGATGAGTAACACCCTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTATACTTACTGGCTGCGCAAGGCCTGAGTCTT  >  NC_002947/1412006‑1412301                                                                                                                                                     |                                                                                                                                                     ttAGCCAGCCATTCCAAGAAGCATCCTGGCGATGCCTTTGGAGTCCCCGCGATGAGTAACACCCTGACCTGCGACGCCGAACTTGTCGCGAGCGGGCTGAATTGCCCTTTGCCACTGCTCAATGCCAAGATGGAGCTCAATCGCCTGGc                                                                                                                                                      <  6:69709/148‑1 (MQ=255)   agccagccATGCCAAGAAGCAGCCTGGCGATGCCTTTGGAGACCCCGCGATGAGTAACACCCTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGCca                                                                                                                                                    >  8:107171‑M2/1‑147 (MQ=255)                            ggCGATGCCTTTGGAGACCCCGCGATGAGTAACACCCTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGc                                                                                                                          <  6:26349/149‑1 (MQ=255)                                     tttGGAGACCCCGCGATGAGTAACCCCCTGACCTGCGACGCCGAACTGGACCCCACCGGGCTGAATTGCCCTATGCCACTGCTCAAGGCCAAGATGCAGCTCAATCGCCTGGC‑CAGTGGCGCGGGGCTCAAGGGTATCGCCACGGACg                                                                                                                  >  2:244332/1‑148 (MQ=255)                                               ccGCGATGAGTAACACCCTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAg                                                                                                       >  1:121400/1‑149 (MQ=255)                                                     tGAGTAACACCCTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCTACGGACGCAGGCTCCCAGCGCGAc                                                                                                 <  2:116182/149‑1 (MQ=255)                                                         tAACACCCTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCgg                                                                                                                                          <  5:2183/104‑1 (MQ=255)                                                         tAACACCCTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCgg                                                                                                                                          >  6:2183/1‑104 (MQ=255)                                                         tAACACCCTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTcc                                                                                             >  5:259414/1‑149 (MQ=255)                                                         tAACACCCTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTcc                                                                                             <  2:7913/149‑1 (MQ=255)                                                               ccTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCa                                                                                                                <  4:19992/124‑1 (MQ=255)                                                               ccTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCa                                                                                                                >  3:19992/1‑124 (MQ=255)                                                               ccTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACtt                                                                                       >  1:207055/1‑149 (MQ=255)                                                                     cTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGcc                                                                                  >  5:122037/1‑148 (MQ=255)                                                                            gCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGc                                                                          >  3:63219/1‑149 (MQ=255)                                                                                 aCTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTc                                                                     <  2:121400/149‑1 (MQ=255)                                                                                        gCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTc                                                                                              <  3:63113/117‑1 (MQ=255)                                                                                        gCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTc                                                                                              >  4:63113/1‑117 (MQ=255)                                                                                            gCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAg                                                                                                                                  >  3:162713/1‑77 (MQ=255)                                                                                            gCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAg                                                                                                                                  <  4:162713/77‑1 (MQ=255)                                                                                             cGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCctgctg                                                          >  3:141749/1‑148 (MQ=255)                                                                                               ggCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCaa                                                       <  4:141749/149‑1 (MQ=255)                                                                                               ggCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCaa                                                       >  2:33593/1‑149 (MQ=255)                                                                                                 cTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGCcagtggcaaagggcaattcagcccgctggcgtccagttcggcgtcgcaggtcagggtgttactcatcgcggggtctccaaaggcatcgccaggctg                                                      <  3:200045‑M2/149‑97 (MQ=255)                                                                                                    aaTTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGaa                                                    <  1:33593/147‑1 (MQ=255)                                                                                                        gCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGCGCAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTc                                                                     >  1:195706/1‑127 (MQ=255)                                                                                                        gCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTc                                                                     <  2:195706/126‑1 (MQ=255)                                                                                                         cccTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGcc                                              >  6:116930/1‑148 (MQ=255)                                                                                                            tttGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGCcagtggcaaagggcaattcagcccgctggcgtccagttcggcgtcgcaggtcagggtgttactcatcgcggggtctccaaaggcatcgccaggctgcttcttggcat                                           <  6:100565‑M2/149‑108 (MQ=255)                                                                                                                 cACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCgg                                      >  3:168348/1‑148 (MQ=255)                                                                                                                  aCTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTa                                    >  7:104022/1‑149 (MQ=255)                                                                                                                    tGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGc                                                                          <  7:119161/109‑1 (MQ=255)                                                                                                                    tGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGc                                                                          >  8:119161/1‑109 (MQ=255)                                                                                                                      cTCAAGGCCAAGATGGAGCTCAATCGCCTGGCcagtggcaaagggcaattcagcccgctggcgtccagttcggcgtcgcaggtcagggtgttactcatcgcggggtctccaaaggcatcgccaggctgcttcttggcatggctggctag                                 >  4:200045‑M2/1‑32 (MQ=255)                                                                                                                         aaGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTAtac                             >  5:276372/1‑149 (MQ=255)                                                                                                                         aaGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTAtac                             >  6:58302/1‑149 (MQ=255)                                                                                                                              cAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTAtacttact                        >  5:150370/1‑149 (MQ=255)                                                                                                                               aaGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTATACTTACTg                       >  8:165645/1‑149 (MQ=255)                                                                                                                                      aGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTATACTTACTGGCTgcgc                <  4:63219/149‑1 (MQ=255)                                                                                                                                            aTCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTATACTTACTGGCTGCGCAAGGcc          >  4:51006/1‑149 (MQ=255)                                                                                                                                             tCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGt                                                                              <  1:105774/80‑1 (MQ=255)                                                                                                                                             tCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGt                                                                              >  2:105774/1‑80 (MQ=255)                                                                                                                                             tCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTATACTTACTGGCTGCGCAAGGCCt         <  7:165645/149‑1 (MQ=255)                                                                                                                                               gCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTATACTTACTGGCTGCGCAAGGCCt         >  8:121445/1‑147 (MQ=255)                                                                                                                                               gCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTATACTTACTGGCTGCGCAAGGCCTGa       <  3:51006/149‑1 (MQ=255)                                                                                                                                                 cTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTATACTTACTGGCTGCGCAAGGCCTGAGt     <  5:116930/149‑1 (MQ=255)                                                                                                                                                    gC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTATACTTACTGGCTGCGCAAGGCCTGAGTCtt  >  5:88066/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CTAGCCAGCCATGCCAAGAAGCAGCCTGGCGATGCCTTTGGAGACCCCGCGATGAGTAACACCCTGACCTGCGACGCCGAACTGGACGCCAGCGGGCTGAATTGCCCTTTGCCACTGCTCAAGGCCAAGATGGAGCTCAATCGCCTGGC‑CAGTGGCGCGGTGCTCAAGGTTATCGCCACGGACGCAGGCTCCCAGCGCGACTTCCGCACTTTCGCCCAGTTGGCCGGTCATACCCTGCTGCAAGAAACGGCCGAGGCCGGTACCTATACTTACTGGCTGCGCAAGGCCTGAGTCTT  >  NC_002947/1412006‑1412301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.