New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 271025535 (0.830)4 (0.100) 4/242 NT 10.5% coding (834/1077 nt) PP_2372 sugar‑binding protein
?NC_002947 = 2710295 35 (0.880)coding (874/1077 nt) PP_2372 sugar‑binding protein

GGGCACACGCCGGGGCGTGACGTGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGT  >  NC_002947/2710151‑2710432
                                                                                                                                                |                                                                                                                                         
gggCACACGCCGGGGCGTGACGTGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCGTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGatgc                                                                                                                                       <  1:258106‑M2/149‑5 (MQ=255)
              gCGTGACGTGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGt                                                                                                                         <  6:48919/149‑1 (MQ=255)
                     gTGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACcg                                                                                                                  >  1:105576/1‑149 (MQ=255)
                      tGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACcgc                                                                                                                 <  6:243451/149‑1 (MQ=255)
                        cTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGa                                                                                                               >  4:56918/1‑149 (MQ=255)
                        cTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGa                                                                                                               >  8:244786/1‑149 (MQ=255)
                             cGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGc                                                                                                           <  8:235722/148‑1 (MQ=255)
                                            cTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTa                                                                                           >  7:58141/1‑149 (MQ=255)
                                            cTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTa                                                                                           >  8:233849/1‑149 (MQ=255)
                                             tCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTAt                                                                                          >  7:125406/1‑149 (MQ=255)
                                                            cgcgcgcgTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAAGCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAgg                                                                            >  5:233030/1‑148 (MQ=255)
                                                            cgcgcgcgGATCGATGGGCTCCTGAGCGTACTGATGGGTGGGCATTTAACGCTTGTCTGTTGGGCCATGGTGATTCTGCTCGATGATGCCCACGGGCTGGCGTTGTACCGCGACGGCGTGCGCTAAAGCCTTATTCCGGTATTGCAgt                                                                            <  2:258106/148‑2 (MQ=255)
                                                                 gcgTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGTTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCg                                                                                      <  4:4770/133‑1 (MQ=255)
                                                                 gcgTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCg                                                                                      >  3:4770/1‑133 (MQ=255)
                                                                 gcgTATCGATGGGCGCCTGAGAGTACTGATGGGTGGGCTTTTCACCCTTGGCGGTTGGTCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCg                                                                      <  5:53988/149‑1 (MQ=255)
                                                                     aTCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGAt                                                                    >  5:115419/1‑147 (MQ=255)
                                                                          tGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCaggcc                                                              >  2:194057/1‑148 (MQ=255)
                                                                             gcgcCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCaggccaagg                                                          >  2:12852/1‑149 (MQ=255)
                                                                                 cTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAg                                                      <  6:115419/149‑1 (MQ=255)
                                                                                    aGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGc                                                    <  2:157039/148‑1 (MQ=255)
                                                                                    aGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGc                                                    <  7:244786/148‑1 (MQ=255)
                                                                                        tACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTgg                                               <  8:125406/149‑1 (MQ=255)
                                                                                          cTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCt                                             <  7:233849/149‑1 (MQ=255)
                                                                                            gATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGatgcccacccatcagtacgctcaggcgcccatcgatacgcgcgcgcaaggcttcgggcgagctgttgacggcagcgaacagcacgtcacgccccgg                                           <  2:230374‑M2/149‑97 (MQ=255)
                                                                                                 gtgggCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTg                                      >  8:183907/1‑149 (MQ=255)
                                                                                                   gggCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGtt                                    <  3:56918/149‑1 (MQ=255)
                                                                                                    ggCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTg                                   >  7:67937/1‑149 (MQ=255)
                                                                                                     gCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCa                                                                  >  5:210481/1‑117 (MQ=255)
                                                                                                     gCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCa                                                                  <  6:210481/117‑1 (MQ=255)
                                                                                                      cATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGatgcccacccatcagtacgctcaggcgcccatcgatacgcgcgcgcaaggcttcgggcgagctgttgacggcagcgaacagcacgtcacgccccggcgtgtgcccg                                 >  1:230374‑M2/1‑43 (MQ=255)
                                                                                                          tCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGatgcccacccatcagtacgctcaggcgcccatcgatacgcgcgcgcaaggcttcgggcgagctgttgacggcagcgaacagcacgtcacgccccggcgtgtgcccggcct                             <  2:142282‑M2/149‑111 (MQ=255)
                                                                                                            aCCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGatgcccacccatcagtacgctcaggcgcccatcgatacgcgcgcgcaaggcttcgggcgagctgttgacggcagcgaacagcacgtcacgccccggcgtgtgcccggcctc                            >  1:142282‑M2/1‑37 (MQ=255)
                                                                                                            aCCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGga                           <  5:204910/149‑1 (MQ=255)
                                                                                                             cccTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGgac                          <  8:58141/149‑1 (MQ=255)
                                                                                                                 tGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGgacgac                       >  4:80727/1‑148 (MQ=255)
                                                                                                                           gCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTgg                                               <  4:234900/114‑1 (MQ=255)
                                                                                                                           gCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTgg                                               >  3:234900/1‑114 (MQ=255)
                                                                                                                                      gctgcACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCg      >  4:36095/1‑144 (MQ=255)
                                                                                                                                      gctgcACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCg      <  3:36095/144‑1 (MQ=255)
                                                                                                                                      gctgcACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGt  >  4:260008/1‑148 (MQ=255)
                                                                                                                                             gatgatGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCaggccaagg                                                          <  6:59749/85‑1 (MQ=255)
                                                                                                                                             gatgatGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCaggccaagg                                                          >  5:59749/1‑85 (MQ=255)
                                                                                                                                                |                                                                                                                                         
GGGCACACGCCGGGGCGTGACGTGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGT  >  NC_002947/2710151‑2710432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.