New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2710255 | 35 (0.830) | 4 (0.100) | 4/242 | NT | 10.5% | coding (834/1077 nt) | PP_2372 | sugar‑binding protein |
? | NC_002947 | = 2710295 | 35 (0.880) | coding (874/1077 nt) | PP_2372 | sugar‑binding protein |
GGGCACACGCCGGGGCGTGACGTGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGT > NC_002947/2710151‑2710432 | gggCACACGCCGGGGCGTGACGTGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCGTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGatgc < 1:258106‑M2/149‑5 (MQ=255) gCGTGACGTGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGt < 6:48919/149‑1 (MQ=255) gTGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACcg > 1:105576/1‑149 (MQ=255) tGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACcgc < 6:243451/149‑1 (MQ=255) cTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGa > 4:56918/1‑149 (MQ=255) cTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGa > 8:244786/1‑149 (MQ=255) cGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGc < 8:235722/148‑1 (MQ=255) cTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTa > 7:58141/1‑149 (MQ=255) cTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTa > 8:233849/1‑149 (MQ=255) tCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTAt > 7:125406/1‑149 (MQ=255) cgcgcgcgTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAAGCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAgg > 5:233030/1‑148 (MQ=255) cgcgcgcgGATCGATGGGCTCCTGAGCGTACTGATGGGTGGGCATTTAACGCTTGTCTGTTGGGCCATGGTGATTCTGCTCGATGATGCCCACGGGCTGGCGTTGTACCGCGACGGCGTGCGCTAAAGCCTTATTCCGGTATTGCAgt < 2:258106/148‑2 (MQ=255) gcgTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGTTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCg < 4:4770/133‑1 (MQ=255) gcgTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCg > 3:4770/1‑133 (MQ=255) gcgTATCGATGGGCGCCTGAGAGTACTGATGGGTGGGCTTTTCACCCTTGGCGGTTGGTCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCg < 5:53988/149‑1 (MQ=255) aTCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGAt > 5:115419/1‑147 (MQ=255) tGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCaggcc > 2:194057/1‑148 (MQ=255) gcgcCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCaggccaagg > 2:12852/1‑149 (MQ=255) cTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAg < 6:115419/149‑1 (MQ=255) aGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGc < 2:157039/148‑1 (MQ=255) aGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGc < 7:244786/148‑1 (MQ=255) tACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTgg < 8:125406/149‑1 (MQ=255) cTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCt < 7:233849/149‑1 (MQ=255) gATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGatgcccacccatcagtacgctcaggcgcccatcgatacgcgcgcgcaaggcttcgggcgagctgttgacggcagcgaacagcacgtcacgccccgg < 2:230374‑M2/149‑97 (MQ=255) gtgggCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTg > 8:183907/1‑149 (MQ=255) gggCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGtt < 3:56918/149‑1 (MQ=255) ggCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTg > 7:67937/1‑149 (MQ=255) gCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCa > 5:210481/1‑117 (MQ=255) gCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCa < 6:210481/117‑1 (MQ=255) cATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGatgcccacccatcagtacgctcaggcgcccatcgatacgcgcgcgcaaggcttcgggcgagctgttgacggcagcgaacagcacgtcacgccccggcgtgtgcccg > 1:230374‑M2/1‑43 (MQ=255) tCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGatgcccacccatcagtacgctcaggcgcccatcgatacgcgcgcgcaaggcttcgggcgagctgttgacggcagcgaacagcacgtcacgccccggcgtgtgcccggcct < 2:142282‑M2/149‑111 (MQ=255) aCCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGatgcccacccatcagtacgctcaggcgcccatcgatacgcgcgcgcaaggcttcgggcgagctgttgacggcagcgaacagcacgtcacgccccggcgtgtgcccggcctc > 1:142282‑M2/1‑37 (MQ=255) aCCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGga < 5:204910/149‑1 (MQ=255) cccTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGgac < 8:58141/149‑1 (MQ=255) tGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGgacgac > 4:80727/1‑148 (MQ=255) gCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTgg < 4:234900/114‑1 (MQ=255) gCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTgg > 3:234900/1‑114 (MQ=255) gctgcACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCg > 4:36095/1‑144 (MQ=255) gctgcACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCg < 3:36095/144‑1 (MQ=255) gctgcACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGt > 4:260008/1‑148 (MQ=255) gatgatGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCaggccaagg < 6:59749/85‑1 (MQ=255) gatgatGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCaggccaagg > 5:59749/1‑85 (MQ=255) | GGGCACACGCCGGGGCGTGACGTGCTGTTCGCTGCCGTCAACAGCTCGCCCGAAGCCTTGCGCGCGCGTATCGATGGGCGCCTGAGCGTACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGT > NC_002947/2710151‑2710432 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |