New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 48081790 (0.000)18 (0.470) 14/234 NT 48.6% intergenic (‑288/‑267) PP_4234/dsbD‑II bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
?NC_002947 5988765 = 38 (0.990)intergenic (+59/‑487) kefB‑III/PP_mr64 glutathione‑regulated potassium/H+ antiporter/C4 ncRNA

GACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGC  >  NC_002947/5988629‑5988909
                                                                                                                                        |                                                                                                                                                      
ggaattcgcgctttggcgggtaggtgtttggcgggaggttttcagcgcatgggaggtgttcgccgggggtgtttcagcgcctgggaggtgtacgccgggagagtttcagcgccagggatatcgagcgccgcacgcgCGGAGCTtcgcgt                                                                                                                                            >  5:102326‑M2/137‑148 (MQ=255)
gcaattctcggtttggcggttaggcttttggcggtagttttgccgcgccttgtaggtgttcgccgggttattttcagcgcctggtaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCgg                                                                                                                                            <  2:129613‑M2/13‑1 (MQ=255)
  ccGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCggg                                                                                                                                           >  1:53419/1‑148 (MQ=255)
       gcgctttggcgggtaggtgtttggcgggaggttttcagcgcctgggaggtgttcgccgggggattttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAAc                                                                                                                                      <  1:3904‑M2/19‑1 (MQ=255)
       ccAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAAcc                                                                                                                                     <  2:77488/149‑1 (MQ=255)
        cAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAAccc                                                                                                                                    >  5:72185/1‑149 (MQ=255)
          agtggATGCAGACGGCCAAGGAGGCGCGGGTGGTGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑Gc                                                                                                                               <  6:169388/145‑1 (MQ=255)
                   aGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCgg                                                                                                                                            <  6:77206/130‑1 (MQ=255)
                   aGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCgg                                                                                                                                            >  5:77206/1‑130 (MQ=255)
                    gACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACgt‑‑tt                                                                                                                  <  1:194040/149‑1 (MQ=255)
                    gACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACgt‑‑tt                                                                                                                  <  4:86663/149‑1 (MQ=255)
                    gACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACgt‑‑tt                                                                                                                  >  3:76036/1‑149 (MQ=255)
                     aggcgtttggcggttgggtttccgggcgtcgtaggtgttcggcggttgattttcagcgcctgggaggtgttcggcgggagagtttcagcgcctgggagatcgagcgccgcctgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACgt‑‑tt                                                                                                                  <  2:124318‑M2/33‑1 (MQ=255)
                            tggcgtcaggttgtcagcggctgggaggggttcggcggttgattatcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCgg                                                                                                           <  3:39363‑M2/40‑1 (MQ=255)
                                ggCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAg                                                                                                      <  3:130689/149‑1 (MQ=255)
                                    cgGGTGGAGCTGGAGGGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTAt                                                                                                  <  3:79187/149‑1 (MQ=255)
                                     tttttcagcgcctgtgaggtgttgggcgggggattttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAattatt                                                                                                 <  1:132003‑M2/50‑1 (MQ=255)
                                                   ggaggtgttcgccgggtgattttcagcgccggggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCgggattt                                                                                     <  1:247450‑M2/62‑4 (MQ=255)
                                                   cGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGAcgcg                                                                                    >  6:116761/1‑148 (MQ=255)
                                                         tttGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGa                                                                             <  8:142428/149‑1 (MQ=255)
                                                           tGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAg                                                                            <  5:116761/148‑1 (MQ=255)
                                                            gATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCATACGT‑‑TTGTTTCGGGCAAGTTATTCCTGTGGGACGAGCACGCGAGcc                                                                          >  8:103797/1‑149 (MQ=255)
                                                                       tttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTcgcg                                                                                                                                             >  6:166044‑M2/66‑77 (MQ=255)
                                                                       tttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTcgcg                                                                                                                                             <  5:166044‑M2/12‑1 (MQ=255)
                                                                       tttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGcat                                                               >  6:95135‑M2/66‑148 (MQ=255)
                                                                          cagcgcctgggaggtgttcggcgggagagtttcagcgcctgggagatcgagggccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGggcatgt                                                             <  5:52476‑M2/86‑4 (MQ=255)
                                                                          cagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGgggcatgtc                                                            >  7:215317‑M2/63‑145 (MQ=255)
                                                                           tGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCt                                                           >  3:77571/1‑149 (MQ=255)
                                                                           agcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGgggcatgtc                                                            <  8:215317‑M2/87‑5 (MQ=255)
                                                                             aGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTc                                                          >  7:72836/1‑148 (MQ=255)
                                                                             aGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTc                                                          >  3:48643/1‑148 (MQ=255)
                                                                              ggCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGa                                                        <  4:76036/149‑1 (MQ=255)
                                                                              ggCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGACAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGa                                                        >  2:185356/1‑149 (MQ=255)
                                                                               gCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCtcg                                                                                                                                                <  3:1536/66‑3 (MQ=255)
                                                                               gCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCtcg                                                                                                                                                >  4:1536/1‑64 (MQ=255)
                                                                                  ttttGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTc                                                                                                <  8:5311/105‑1 (MQ=255)
                                                                                  ttttGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTc                                                                                                >  7:5311/1‑105 (MQ=255)
                                                                                    gaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATcgc                                                  <  5:95135‑M2/97‑1 (MQ=255)
                                                                                     gggccatcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATcgcg                                                 <  4:33330‑M2/98‑1 (MQ=255)
                                                                                       gtgttcggcgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGcgtc                                               <  6:102326‑M2/100‑1 (MQ=255)
                                                                                       gtgttcgccgggagagtttcagcgcctgggagagcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGcgt                                                <  1:263808‑M2/99‑1 (MQ=255)
                                                                                       gcgcGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc                                               <  4:77571/149‑1 (MQ=255)
                                                                                        cgcgTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtcg                                              >  3:258922/1‑149 (MQ=255)
                                                                                         gcgTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGgc                                                                   <  1:258125/127‑1 (MQ=255)
                                                                                         gcgTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGgc                                                                   >  2:258125/1‑127 (MQ=255)
                                                                                             gCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTaca                                          >  7:33643/1‑148 (MQ=255)
                                                                                              ccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTacaaa                                        <  7:37460‑M2/107‑1 (MQ=255)
                                                                                                ttGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCgg                                                                                                           >  8:55752/1‑80 (MQ=255)
                                                                                                ttGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCgg                                                                                                           <  7:55752/80‑1 (MQ=255)
                                                                                                  gAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTacaaaca                                      <  8:72836/147‑1 (MQ=255)
                                                                                                    gggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGc                                  <  3:134500/149‑1 (MQ=255)
                                                                                                     ggTTGTAGAGCGTGTGAGATTGTGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCCCATCTCCTACGTCCTCATTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTacaaa                                        <  1:84046/148‑1 (MQ=25)
                                                                                                        tGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTc                              <  6:75656/149‑1 (MQ=255)
                                                                                                         gTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTc                              <  4:258922/148‑1 (MQ=255)
                                                                                                            gTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc                                                    >  4:174209/1‑123 (MQ=255)
                                                                                                            gTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTcgcgc                          >  1:31127/1‑149 (MQ=255)
                                                                                                                       aTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGcac               <  4:48643/149‑1 (MQ=255)
                                                                                                                            gcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc                                               >  6:121405‑M2/13‑112 (MQ=255)
                                                                                                                            gcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc                                               <  5:121405‑M2/100‑1 (MQ=255)
                                                                                                                            gcgcCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCaggag          >  5:247235/1‑149 (MQ=14)
                                                                                                                                   ccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAg                                    >  4:249155‑M2/6‑116 (MQ=255)
                                                                                                                                   ccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAg                                    <  3:249155‑M2/111‑1 (MQ=255)
                                                                                                                                    cgcgcgGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGTCTGGc  >  3:3442/1‑149 (MQ=14)
                                                                                                                                    cgcgCGGCGATTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACTCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGc  <  1:185356‑M2/145‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                                      
GACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGC  >  NC_002947/5988629‑5988909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.