New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4864409	33 (0.780)	3 (0.080)	3/234	NT	8.5%	coding (1464/3489 nt)	smc	chromosome partition protein Smc
	?	NC_002947	= 4864434	35 (0.910)					coding (1439/3489 nt)	smc	chromosome partition protein Smc

TTCGGCCAGCCGCGGCTGTTGCTCCAGCCCTTGGCCGTGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGC  >  NC_002947/4864289‑4864574                                                                                                                                                  |                                                                                                                                             ttCGGCCAGCCGCGGCTGTTGCTCCAGCCCTTGGCCGTGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTgcg                                                                                                                                           <  6:99498‑M2/149‑4 (MQ=255)       cAGCCGCGGCTGTTGCTCCAGCCCTTGGCCGTGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTgcgcctggg                                                                                                                                     <  6:248682‑M2/149‑10 (MQ=255)        aGCCGCGGCTGTTGCTCCAGCCCTTGGCCGTGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTgcgcctgggt                                                                                                                                    >  6:44390‑M2/1‑139 (MQ=255)         gCCGCGGCTGTTGCTCCAGCCCTTGGCCGTGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTgcgcctgggtg                                                                                                                                   >  4:130788‑M2/1‑138 (MQ=255)           cgcgGCTGTTGCTCCAGCCCTTGGCCGTGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGc                                                                                                                                 <  4:183177/149‑1 (MQ=255)            gcgGCTGTTGCTCCAGCCCTTGGCCGTGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGcc                                                                                                                                >  2:233089/1‑149 (MQ=255)                      cTCCAGCCCTTGGCCGTGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGtt                                                                                                                      <  1:233089/149‑1 (MQ=255)                        ccAGCCCTTGGCCGTGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGc                                                                                                                    >  1:239692/1‑149 (MQ=255)                            cccTTGGCCGTGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTcgc                                                                                                                >  6:191525/1‑149 (MQ=255)                                      tGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTc                                                                                                      <  5:99498/149‑1 (MQ=255)                                              ttGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCt                                                                                              <  5:191525/149‑1 (MQ=255)                                                   cagcaCCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATc                                                                                         <  6:199728/149‑1 (MQ=255)                                                    agcaCCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCa                                                                                        >  4:185715/1‑149 (MQ=255)                                                          tGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGc                                                                                   >  8:90942/1‑148 (MQ=255)                                                             gcCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCtt                                                                               >  7:178453/1‑149 (MQ=255)                                                               ccGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCg                                                                             >  7:245094/1‑149 (MQ=255)                                                               ccGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCg                                                                             <  7:8005/149‑1 (MQ=255)                                                                   cTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCaga                                                                         <  7:78252/149‑1 (MQ=255)                                                                               ctgctgCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGttctt                                                             >  2:183743/1‑149 (MQ=255)                                                                                  ctgcAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGttcttc                                                            <  7:90942/147‑1 (MQ=255)                                                                                  ctgcAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCca                                                          <  2:235472/149‑1 (MQ=255)                                                                                   tgcAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAg                                                                                                   >  1:47440/1‑107 (MQ=255)                                                                                   tgcAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAg                                                                                                   <  2:47440/107‑1 (MQ=255)                                                                                     cAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCcagca                                                       <  5:183274/149‑1 (MQ=255)                                                                                           ttCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCAtt                                                  >  8:76729/1‑148 (MQ=255)                                                                                                gCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCgctg                                            >  6:161705/1‑149 (MQ=255)                                                                                                     gCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGc                                       >  8:131570/1‑149 (MQ=255)                                                                                                        aGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATTACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAg                                    >  6:252603/1‑149 (MQ=255)                                                                                                         ggCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGt                                   <  1:183743/149‑1 (MQ=255)                                                                                                             cccacccaGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGTTGCt                               <  5:161705/149‑1 (MQ=255)                                                                                                               cacccaGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGTTGCTCg                             <  2:239692/149‑1 (MQ=255)                                                                                                                  ccaGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGttcttc                                                            <  4:236260/115‑1 (MQ=255)                                                                                                                  ccaGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGttcttc                                                            >  3:236260/1‑115 (MQ=255)                                                                                                                  ccaGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGTTGCTCGGc                           >  5:239569/1‑148 (MQ=255)                                                                                                                    aGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTgcgcctgggtgggcgcctggcctcgctggaagccttgcagcaggccgccctggagccgggcgcaggtgctgcgcaatggctgcacggccaagggctggagcaacagccgcggctggcc                        <  7:116835‑M2/149‑119 (MQ=255)                                                                                                                     ggCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGc                                                                       >  2:130539/1‑101 (MQ=255)                                                                                                                     ggCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGc                                                                       <  1:130539/101‑1 (MQ=255)                                                                                                                      gcgcTGCAGGTCGCCCTGTGCCTGCTGTTgcgcctgggtgggcgcctggcctcgctggaagccttg                                                                                                         >  7:6709‑M2/1‑29 (MQ=255)                                                                                                                      gcgcTGCAGGTCGCCCTGTGCCTGCTGTTgcgcctgggtgggcgcctggcctcgctggaagccttg                                                                                                         <  8:6709‑M2/66‑38 (MQ=255)                                                                                                                         cTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGTTGCTCGGCCAGTTCGa                   <  3:185715/149‑1 (MQ=255)                                                                                                                                  gCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGTTGCTCGGCCAGTTCGAGCATggcgg          >  5:206361/1‑149 (MQ=255)                                                                                                                                    ccTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGTTGCTCGGCCAGt                       <  7:136999/134‑1 (MQ=255)                                                                                                                                    ccTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGTTGCTCGGCCAGt                       >  8:136999/1‑134 (MQ=255)                                                                                                                                          ccTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGc  >  5:181404/1‑149 (MQ=255)                                                                                                                                                gTTGCGCCTGGGTGTCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGTTGCTCg                             <  6:245015/116‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                             TTCGGCCAGCCGCGGCTGTTGCTCCAGCCCTTGGCCGTGCAGCCATTGCGCAGCACCTGCGCCCGGCTCCAGGGCGGCCTGCTGCAAGGCTTCCAGCGAGGCCAGGCGCCCACCCAGGCGCTGCAGGTCGCCCTGTGCCTGCTGTTGCGCCTGGGTGGCCTGCTGCAGTTGCTCGCGCGCGCTTTCCAGGCGCTCGATCACCTGCTCTTCGCAGAGCTGCAGTTCTTCCAGCAGCATTTCGCTGCTGGCCAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGC  >  NC_002947/4864289‑4864574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.