New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5209354 =	54 (1.280)	3 (0.080)	3/244	NT	7.1%	coding (781/1134 nt)	rnd	ribonuclease D
	?	NC_002947	5209393 =	28 (0.700)					coding (742/1134 nt)	rnd	ribonuclease D

AAGGGCGCAGGCCATTGCTCGGCCGGCAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAGTTGTTGAGGCGCCAGCTTCCAGGCCAGCTTGACGTCGC  >  NC_002947/5209248‑5209530                                                                                                                                                  |                                                                                                                                          aaGGGCGCAGGCCATTGCTCGGCCGGCAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATggg                                                                                                                                        >  6:9223/1‑149 (MQ=255)  aacaactggcagtgctacgtgagctgtgcgcctggcgcgaacgcgaagcgcgcaaccgctatgtgccgcgtaatcgtatcctcaaggagcactcgctgtggcccaTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATgg                                                                                                                                         >  8:186819‑M1/106‑147 (MQ=255)  aGGGCGCAGGCCATTGCTCGGCCGGCAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGc                                                                                                                                       <  1:75433/149‑1 (MQ=255)  aGGGCGCAGGCCATTGCTCGGCCGGCAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGGCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGc                                                                                                                                       <  1:241649/149‑1 (MQ=255)    ggCGCAGGCCATTGCTCGGCCGGCAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCca                                                                                                                                     >  7:115172/1‑149 (MQ=255)      cgcAGGCCATTGCTCGGCCGGCAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCcaca                                                                                                                                   <  6:50539/149‑1 (MQ=255)         aGGCCATTGCTCGGCCGGCAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGc                                                                                                                                 >  2:151805/1‑148 (MQ=255)            ccATTGCTCGGCCGGCAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGt                                                                                                                             <  2:26260/149‑1 (MQ=255)                     ggccggcAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCtt                                                                                                                      >  6:123833/1‑147 (MQ=255)                      gccggcAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGCCCATGGGCCACAGCGAGTGCTCCTTGAg                                                                                                                   <  1:151805/149‑1 (MQ=255)                         ggcAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATgg                                                                                                                                         >  1:56490/1‑124 (MQ=255)                         ggcAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATgg                                                                                                                                         <  2:56490/124‑1 (MQ=255)                          gcAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATgg                                                                                                                                         <  7:22091/123‑1 (MQ=255)                          gcAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATgg                                                                                                                                         >  8:22091/1‑123 (MQ=255)                                  gcggcgCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTAc                                                                                                        <  8:115172/148‑1 (MQ=255)                                   cggcgCGGTTGATCTGCTGGATGAGGAAGTCACCGTCCTGTCGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTTCTCGTTGAGGATACGATTAcgc                                                                                                      <  7:90060/149‑1 (MQ=255)                                    ggcgCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTAcgcg                                                                                                     <  5:9223/149‑1 (MQ=255)                                      cgcgcTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCgg                                                                                                    >  1:251169/1‑148 (MQ=255)                                           ttGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATAc                                                                                                              >  5:58989/1‑133 (MQ=255)                                           ttGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATAc                                                                                                              <  6:58989/133‑1 (MQ=255)                                             gATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATcgc                                                                                            >  6:82379/1‑149 (MQ=255)                                               aagcgcgcaaccgcgatgtgccgcgtaatcgtatcctcaaggagcactcgctgtggcccaTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGc                                                                                                                                       >  4:264118‑M1/61‑104 (MQ=255)                                               aagcgcgcaaccgcgatgtgccgcgtaatcgtatcctcaaggagcactcgctgtggcccaTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGc                                                                                                                                       <  3:264118‑M1/44‑1 (MQ=255)                                                            gAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCttcgc                                                                             >  7:253749/1‑149 (MQ=255)                                                                  aCCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCttcgcgttcgc                                                                       >  3:113216/1‑149 (MQ=255)                                                                        cTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAgg                                                                 <  8:253749/149‑1 (MQ=255)                                                                        cTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAgg                                                                 >  1:194666/1‑149 (MQ=255)                                                                         tGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGGTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATa                                                                                                               <  2:100551/102‑1 (MQ=255)                                                                         tGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATa                                                                                                               >  1:100551/1‑102 (MQ=255)                                                                                   tGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCgcgc                                                                     <  6:11326/134‑1 (MQ=255)                                                                                   tGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCgcgc                                                                     >  5:11326/1‑134 (MQ=255)                                                                                             cATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTg                                            >  1:15943/1‑149 (MQ=255)                                                                                              aTCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGc                                           >  2:169296/1‑149 (MQ=255)                                                                                                   gtcgATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGTTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAgtt                                      <  6:232240/149‑1 (MQ=255)                                                                                                      gcccatggccaaaagccagccgaacaacctgtcggccttggccaTGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCtt                                                                                <  3:264118‑M2/60‑1 (MQ=255)                                                                                                      gcccatggccaaaagccagccgaacaacctgtcggccttggccaTGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCtt                                                                                >  4:264118‑M2/45‑104 (MQ=255)                                                                                                        ccatggccaaaagccagccgaacaacctgtcggccttggccaTGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATAGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAgttgtt                                   >  8:186819‑M2/43‑147 (MQ=255)                                                                                                           TGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCttcgcgtt                                                                          <  8:111670‑M1/105‑1 (MQ=255)                                                                                                           TGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCttcgcgtt                                                                          >  7:111670‑M1/1‑105 (MQ=255)                                                                                                            GGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAGTTGTTGAGgcg                             <  3:211661‑M1/149‑1 (MQ=255)                                                                                                             GCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAGTTGTTGAGgcgc                            >  4:211661‑M1/1‑149 (MQ=255)                                                                                                              CCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAGTTGTTGAGgcgc                            <  8:164037‑M1/148‑1 (MQ=255)                                                                                                                     cGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAGTTGTTGAGGCGCCAGCTTc                     >  5:188062/1‑148 (MQ=255)                                                                                                                           gttgttCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAGTTGTTGAGGCGCCAGCTTCCAGGCCa              <  7:164037/149‑1 (MQ=255)                                                                                                                                 cGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCTCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCAATGCCAGTAGTTGAGGCGCCAGATTCCAGCCAAGCTTGa        >  8:250277/1‑149 (MQ=255)                                                                                                                                 cGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAGTTGTTGAGGCGCCAGCTTCCAGGCCAGCTTg         <  2:194666/148‑1 (MQ=255)                                                                                                                                       gctTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAGTTGTTGAGGCGCCAGCTTCCAGGCCAGCTTGACGTcgc  <  7:212506/149‑1 (MQ=255)                                                                                                                                       gctTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAGTTGTTGAGGCGCCAGCTTCCAGGCCAGCTTGACGTcg   <  7:250277/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                          AAGGGCGCAGGCCATTGCTCGGCCGGCAGGCTGGCGGCGCGCTTGATCAGCTGGATGAGGAACTCACCGTCCTGACGAATGGTGCGCGGGTGCATCTCGTCGATCTTGGCCAAGGCCGACAGGTTGTTCGGCTGGCTTTTGGCCATGGGCCACAGCGAGTGCTCCTTGAGGATACGATTACGCGGCACATCGCGGTTGCGCGCTTCGCGTTCGCGCCAGGCGCACAGCTCACGTAGCACTGCCAGTTGTTGAGGCGCCAGCTTCCAGGCCAGCTTGACGTCGC  >  NC_002947/5209248‑5209530

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.