New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5210219 =	45 (1.070)	4 (0.110)	4/226	NT	10.5%	intergenic (‑85/+93)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	5210310 =	29 (0.780)					intergenic (‑176/+2)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase

TATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGC  >  NC_002947/5210166‑5210452                                                                                                                                                 |                                                                                                                                               tataCGGGGGGGGCACTGGGGGTGAAACTGTCCCGGTTTTGGGGGGCTGTCCACCCGGTGGGAGCGGGCGCGCCGGCTAATTACGGCAACAGGGTTTATGGCCCGGTTTTGCCGGGGTTCGCGGGGGTGCCCGCTCCCACAGGGCTTc                                                                                                                                             <  2:54903/148‑1 (MQ=25) tataCGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCtt                                                                                                                                              >  8:1559/1‑147 (MQ=255)    aCGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTAGCCGGCGTGCCCGCTCCCACAGGGCTTCAgcg                                                                                                                                         >  5:20455/1‑149 (MQ=255)                 tGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACCCGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGGCCGCTCCCACACGGCTTCAGCGCGTGGccgcccgc                                                                                                                            >  5:33400/1‑149 (MQ=39)                     ggTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAg                                                                                                                        >  5:194843/1‑149 (MQ=255)                               tCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGACGGCAACCCGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGGGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGccggcaac                                                                                                               <  7:155463/148‑1 (MQ=255)                                cccGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGccggcaaccg                                                                                                             <  7:100408/149‑1 (MQ=255)                                  cGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGccggcaaccgg                                                                                                            >  4:119423/1‑148 (MQ=255)                                   gCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGccggcaaccggc                                                                                                           >  5:131697/1‑148 (MQ=255)                                   gCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGccggcaaccggc                                                                                                           >  1:44016/1‑148 (MQ=255)                                       ttCGGGGGCCGTCCAGCCTGTGGGTGCGGGGGCGCGCGCGATTGCCGGCATCACGGTGTATGGCCCGGGTTTGCGGGGGGTGGCGGGGGTGCCCGCTCGCACAGGGCTTGAGCGCTTGGCCGCCAGCCAAGGGCGGCAACCGGCAAAc                                                                                                       <  6:110213/148‑1 (MQ=255)                                             ggCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTTTATGGCCCGGGTTTGCCCGGTTTCGCGGTCGTGCCCGCTCCCACAGGGCTTCAGCTCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCa                                                                                                <  1:175233/149‑1 (MQ=255)                                                  tCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGAc                                                                                           <  7:1559/149‑1 (MQ=255)                                                     aCCGTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTCCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCCGCAACCGGCAAACATGTCCAGCGActgc                                                                                        <  1:152062/149‑1 (MQ=255)                                                     aCCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGActgc                                                                                        >  8:134355/1‑149 (MQ=255)                                                       CCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCGGGCAACCGGCAAACATGTCCAGCGActgctg                                                                                      <  3:234899‑M1/149‑1 (MQ=255)                                                       CCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGActgctg                                                                                      <  3:212844‑M1/149‑1 (MQ=255)                                                           TGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTag                                                                                  >  3:65073‑M1/1‑149 (MQ=255)                                                             GGAGCGGGCGCGCCCGCGAATGACGGCAACACGGTGTATGGCCCGGGTTTCCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTagag                                                                                >  3:192340‑M1/1‑149 (MQ=255)                                                                 CGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCg                                                                            >  2:44016‑M1/1‑149 (MQ=255)                                                                 CGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCg                                                                            >  6:131697‑M1/1‑149 (MQ=255)                                                                  GGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCgg                                                                           >  7:134355‑M1/1‑149 (MQ=255)                                                                   ggcacgcccgcgaacccgggcaaacccgggccatacaccgtgttgccttcattcgcgggcgcgcccgctcccacagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCgg                                                                           >  8:232114‑M2/79‑148 (MQ=255)                                                                    gcacgcccgcgaacccgggcaaacccgggccatacaccgtgttgccttcattcgcgggcgcgcccgctcccacagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTa                                                                         >  3:241169‑M2/78‑149 (MQ=255)                                                                         cccGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTAc                                                                    <  4:234899/149‑1 (MQ=255)                                                                          ccGCGAATGAAGGCAAAACGGTGTATGGACCCGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCACAGCATTGCCGCCACACAAGGACCGCAACCGGCAAACATCTCCAGCGACTGCAGGTAGAGCTCGGTATCTAc                                                                    >  2:75459/1‑148 (MQ=255)                                                                           cgcgaacccgggcaaacccgggccatacaccgtgttgccttcattcgcgggcgcgcccgctcccacagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCt                                                                  <  7:232114‑M2/79‑1 (MQ=255)                                                                                     gcaaaCCCGGTGTATGGCCCGGGTTTGCCGGGGTGCGGGGGCGGGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGc                                                         <  2:119982/145‑1 (MQ=255)                                                                                         aacccgggccatacaccgtgttgccttcattcgcgggcgcgcccgctcccacagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGc                                                    <  4:241169‑M2/93‑1 (MQ=255)                                                                                             ggTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATc                                                 >  3:246361/1‑148 (MQ=255)                                                                                               tgtATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAg                                              <  6:194843/149‑1 (MQ=255)                                                                                                 tATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTg                                            <  1:107773/149‑1 (MQ=255)                                                                                                 tATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTg                                            <  1:75459/149‑1 (MQ=255)                                                                                                     gCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTAc                                                                    >  8:95971/1‑121 (MQ=255)                                                                                                     gCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTAc                                                                    <  7:95971/121‑1 (MQ=255)                                                                                                     gCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGaa                                         >  6:55824/1‑148 (MQ=255)                                                                                                       ccGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAg                                      <  4:212844/149‑1 (MQ=255)                                                                                                       ccGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAg                                      >  6:47697/1‑149 (MQ=255)                                                                                                                cccGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTg                             >  4:94008/1‑149 (MQ=255)                                                                                                                cccGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTg                             <  5:47697/149‑1 (MQ=255)                                                                                                                     gTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGa                          >  8:5858/1‑147 (MQ=255)                                                                                                                         gcgGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGCACGGct                     >  3:172663/1‑147 (MQ=255)                                                                                                                               gTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATc              >  3:182037/1‑149 (MQ=255)                                                                                                                                tGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCg             <  3:119423/149‑1 (MQ=255)                                                                                                                                     gctcccacagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAg        >  2:63772‑M2/13‑149 (MQ=255)                                                                                                                                         ccacagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACTGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGt    <  3:94008‑M2/141‑1 (MQ=255)                                                                                                                                         ccacagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGt    >  2:63262‑M2/9‑149 (MQ=255)                                                                                                                                           acagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGc  <  4:182037‑M2/143‑1 (MQ=255)                                                                                                                                            cagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGaa                                         <  8:8940‑M2/104‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                               TATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGC  >  NC_002947/5210166‑5210452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.