New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5270866 | 49 (1.160) | 3 (0.070) | 3/248 | NT | 5.8% | coding (352/420 nt) | mscL | large‑conductance mechanosensitive channel |
? | NC_002947 | = 5270884 | 51 (1.260) | coding (370/420 nt) | mscL | large‑conductance mechanosensitive channel |
GGCAAGTTCATCCAGACCGTAATCGACTTCGTGATCGTGGCCTTTGCCATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCGCGCCTA > NC_002947/5270740‑5271031 | ggCAAGTTCATCCAGACCGTAATCGACTTCGTGATCGTGGCCTTTGCCATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGAccg < 4:26404‑M2/148‑4 (MQ=255) cAAGTTCATCCAGACCGTAATCGACTTCGTGATCGTGGCCTTTGCCATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGaaa > 8:74151/1‑149 (MQ=255) aaGTTCATCCAGACCGTAATCGACTTCGTGATCGTGGCCTTTGCCATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAAt > 1:113923/1‑149 (MQ=255) aaGTTCATCCAGACCGTAATCGACTTCGTGATCGTGGCCTTTGCCATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAAt > 2:31281/1‑149 (MQ=255) ccAGACCGTAATCGACTTCGTGATCGTGGCCTTTGCCATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGAtt > 5:27483/1‑149 (MQ=255) ccGTAATCGACTTCGTGATCGTGGCCTTTGCCATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTc < 6:8449/149‑1 (MQ=255) aTCGACTTCGTGATCGTGGCCTTTGCCATCTTCATGGGCGTGAAGTCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGa < 1:94023/148‑1 (MQ=255) aTCGACTTCGTGATCGTGGCCTTTGCCATCTTCATGGGCGTGAAGGCGATCAACAATCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGa < 3:60743/148‑1 (MQ=255) ttCGTGATCGTGGCCTTTGCCATCTTCATGGGCGTGAAGGCGATCAACAACCTCAAGCGTGAAGAAGCCCTGGCGCCGACTACGCCGCCAGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCAGCGATTTGCTCAAGACGCAGaa > 5:31639/1‑149 (MQ=255) ccTTTGCCATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTg > 2:176501/1‑149 (MQ=255) tttGCCATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGcc > 7:123735/1‑149 (MQ=255) tGCCATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGcc < 4:28092/147‑1 (MQ=255) cATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCtt > 8:227835/1‑141 (MQ=255) cATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGaa < 6:27483/149‑1 (MQ=255) cATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGa > 1:1452/1‑148 (MQ=255) cATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCACAACCAGAATCGCtt < 7:227835/141‑1 (MQ=255) tCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGc > 4:189479/1‑149 (MQ=255) gggCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCggg > 2:13098/1‑149 (MQ=255) ggCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCggg < 3:26404/148‑1 (MQ=255) aaGGCGATCAACAAGCTCAAGCGTGAAGAACCCGTGGCGCCGACTACGCCGCCGGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTg < 8:212503/149‑1 (MQ=255) ggCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTg > 2:215267/1‑147 (MQ=255) gATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCtt < 8:110337/120‑1 (MQ=255) gATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCgg > 4:32401/1‑136 (MQ=255) gATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCgg < 3:32401/136‑1 (MQ=255) acaaGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGgggcggg > 5:116296/1‑149 (MQ=255) caaGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCTGGGGCGCTGTAGgggcgggc > 2:184859/1‑149 (MQ=255) caaGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGgggcgggc < 2:113923/149‑1 (MQ=255) aaGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGaa > 6:211533/1‑95 (MQ=255) aaGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGaa < 5:211533/95‑1 (MQ=255) aaGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCctgctg < 1:37409/148‑1 (MQ=255) aaGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTg‑g > 8:220045/1‑149 (MQ=255) gTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGaa < 1:184859/149‑1 (MQ=255) gaagaaGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGaa > 5:131096/1‑147 (MQ=255) aagaagCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAaga < 2:74458/148‑1 (MQ=255) aagaagCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAaga < 1:215267/148‑1 (MQ=255) gtaggcGTGGCGCCGACTACGGCGCCTGTGCCTTCGGGAGAAGAGAGGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCTGAACCAGAATCGCTTGCCTTTAAATTGCCGGGGGCGGTGTAGGGGCGGGGCTGCTG‑GCGAAGAGTc < 6:31639/144‑1 (MQ=255) aagCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCctg < 8:39653/135‑1 (MQ=255) aagCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCctg > 7:39653/1‑135 (MQ=255) ccGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGt < 1:13098/149‑1 (MQ=255) cGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTg < 3:189479/149‑1 (MQ=255) tACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCa > 6:118415/1‑149 (MQ=255) gccgccTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCACTGCGGAGGATGGCAcag > 8:118666/1‑147 (MQ=255) cTGTGCCTTCGGCAGAAGAGACGCTGCTGAccgaaggcacaggcggcgtagtcggcgccacggcttcttcacgcttgagcttgttgatcgccttcacgcccatgaagatggcaaaggccacgatcacgaagtcgattacggtctggat < 4:264413‑M2/148‑119 (MQ=255) tgCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTGAGCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTc < 1:176501/147‑1 (MQ=255) tgCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGc < 7:74151/148‑1 (MQ=255) ccTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGCCgg > 4:128672/1‑149 (MQ=255) cTTCGGCAGAAGAGACGCTGCTGAccgaaggcacaggcggcgtagtcggcgccacggcttcttcacgcttgagcttgttgatcgccttcacgcccatgaagatggcaaag < 7:93034‑M2/110‑87 (MQ=255) cTTCGGCAGAAGAGACGCTGCTGAccgaaggcacaggcggcgtagtcggcgccacggcttcttcacgcttgagcttgttgatcgccttcacgcccatgaagatggcaaag > 8:93034‑M2/1‑24 (MQ=255) cGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGCCGGTGtt > 3:240595/1‑149 (MQ=255) gCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGCCGGTGTTcg > 3:164145/1‑149 (MQ=255) gaagaGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGCCGGTGTTCGCgg < 7:128367/149‑1 (MQ=255) agagACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGt < 7:220045/149‑1 (MQ=255) agagACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGt < 1:31281/149‑1 (MQ=255) gaCGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGaa > 6:161039/1‑100 (MQ=255) gaCGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGaa < 5:161039/100‑1 (MQ=255) cGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGgggcgg < 7:13123/85‑1 (MQ=255) cGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGgggcgg > 8:13123/1‑85 (MQ=255) cGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAAcc > 5:159832/1‑149 (MQ=255) aCCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCGCGCCTa > 3:235054/1‑148 (MQ=255) aCCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCACTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCGCGCCTa > 5:63920/1‑148 (MQ=255) | GGCAAGTTCATCCAGACCGTAATCGACTTCGTGATCGTGGCCTTTGCCATCTTCATGGGCGTGAAGGCGATCAACAAGCTCAAGCGTGAAGAAGCCGTGGCGCCGACTACGCCGCCTGTGCCTTCGGCAGAAGAGACGCTGCTGACCGAAATCCGCGATTTGCTCAAGACGCAGAACCAGAATCGCTTGCCTTGAAATTGCCGGGGGCGCTGTAGGGGCGGGCCTGCTG‑GCGAAGAGTCCAGTGCGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCGCGCCTA > NC_002947/5270740‑5271031 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |