New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5786472 =	61 (1.450)	3 (0.090)	3/210	NT	6.2%	intergenic (+15/‑116)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	5786557 =	41 (1.190)					intergenic (+100/‑31)	PP_5068/trxC	hypothetical protein/thioredoxin

GACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGT  >  NC_002947/5786411‑5786699                                                                                                                                                    |                                                                                                                                                ccttcgcgggtaaacccgctcctacaaggttttccacagtgttcgctatctgtggtgggcttttaggagcgggcttgcccgcgaacacacataatggggtgtcagGCACCGGCTTCGCCGGTGTTCGCGGGCACTCCCGCTCCCAAAA‑g                                                                                                                                               <  7:78268‑M2/44‑1 (MQ=255)     gccgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAAc                                                                                                                                          >  1:217442/1‑149 (MQ=255)      ccgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAAcc                                                                                                                                         <  8:13311/149‑1 (MQ=255)       cgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCGTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCg                                                                                                                                        <  8:70020/149‑1 (MQ=255)        ggAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGt                                                                                                                                       <  8:86138/149‑1 (MQ=255)              gggCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAAcc                                                                                                                                  >  1:28212/1‑148 (MQ=255)                   aGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTTATGGA‑TTCCACCGGCTTCGCGGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAacac                                                                                                                            <  8:88486/149‑1 (MQ=255)                   aGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAacac                                                                                                                            <  5:261504/149‑1 (MQ=255)                      aCCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAacac                                                                                                                            <  3:180637/146‑1 (MQ=255)                      aCCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAacac                                                                                                                            >  4:180637/1‑146 (MQ=255)                        cTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCg                                                                                                                          >  6:265938/1‑146 (MQ=255)                        cTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGga                                                                                                                        <  5:265938/148‑1 (MQ=255)                              aTCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCTCACAA‑GGAAACCGTGAACCCAACACCGGAGATGaaa                                                                                                                 <  1:180874/149‑1 (MQ=255)                              aTCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGaaa                                                                                                                 <  2:232225/149‑1 (MQ=255)                              aTCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGaaa                                                                                                                 <  2:217442/149‑1 (MQ=255)                                 aGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATga                                                                                                              <  8:78778/149‑1 (MQ=255)                                  gctgctCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATgac                                                                                                             <  8:207172/149‑1 (MQ=255)                                     gctCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATgaccga                                                                                                          >  3:254015/1‑149 (MQ=255)                                      ctctTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCCCGAAGCCAGCAACCGGATTGA‑TTTCACCCGCTTAGCCCGTGTTTGCCGGCCCCCCCGCAACCCCAACGCAAACCG‑GAACCCAACACCCGAGATGAAAAgaacgcc                                                                                                         >  6:44192/1‑147 (MQ=255)                                         ttCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCCCGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCa                                                                                                      >  8:225872/1‑149 (MQ=255)                                         ttCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCa                                                                                                      >  4:217695/1‑149 (MQ=255)                                          tCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCAc                                                                                                     >  7:114828/1‑149 (MQ=255)                                            cTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTg                                                                                                   >  7:29583/1‑149 (MQ=255)                                            cTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTg                                                                                                   <  8:29583/149‑1 (MQ=255)                                              gATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACtcg                                                                                                  >  8:75613/1‑146 (MQ=255)                                                   gcgcCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑ATGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAGCACCGGAGATGAAATGACCGACCCACTGGTAATcc                                                                                            >  3:47277/1‑149 (MQ=255)                                                       cGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATccc                                                                                           >  7:134917/1‑146 (MQ=255)                                                       cGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATccc                                                                                           <  8:134917/146‑1 (MQ=255)                                                          ctCCTGTGGGCGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGccc                                                                                     <  6:145569/148‑1 (MQ=255)                                                                     GCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGgaga                                                                                                                      >  4:62820‑M1/1‑105 (MQ=255)                                                                       GGGCGTGCCCGCGAAGCAGGCAACGTTATGGA‑TTCCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGc                                                                        >  5:44192‑M1/1‑149 (MQ=255)                                                                        GGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGcc                                                                       >  7:75613‑M1/1‑149 (MQ=255)                                                                         GCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAAGCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCt                                                                      <  5:80397‑M1/149‑1 (MQ=255)                                                                               CCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCg                                                                <  6:222442‑M1/149‑1 (MQ=255)                                                                                ccgcgaacaccggcgaagccggtgcaatccatcacgttgcctgcttcgcgggcacgcccgctcccacaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCg                                                                >  7:211516‑M2/69‑149 (MQ=255)                                                                                CGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGc                                                               >  6:80397‑M1/1‑149 (MQ=255)                                                                                    gaacaccggcgaagccggtgcaatccatcacgttgcctgcttcgcgggcacgcccgctcccacaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCAc                                                                                 >  6:240800‑M2/65‑128 (MQ=255)                                                                                    gaacaccggcgaagccggtgcaatccatcacgttgcctgcttcgcgggcacgcccgctcccacaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCAc                                                                                 <  5:240800‑M2/64‑1 (MQ=255)                                                                                          gCAACGTGATGGACTTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACaa                                                                                                                                                 <  1:56369/59‑1 (MQ=17)                                                                                          gCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCCCCTGCccgccg                                                     >  3:216510/1‑149 (MQ=255)                                                                                             aCGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAgc                                                  <  8:123886/149‑1 (MQ=255)                                                                                                   tGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTgg                                            >  3:128680/1‑149 (MQ=255)                                                                                                   tGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTg                                             <  5:222442/148‑1 (MQ=255)                                                                                                         tGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGAt                                       >  2:229178/1‑149 (MQ=255)                                                                                                           cACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGCACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCGGCCCCCCCTGCAACGGCCTCAACCGCCTGCCCGCCGCGCGCCTGGGCGATgc                                     >  5:195206/1‑149 (MQ=255)                                                                                                           cACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCCCTGGTAATCCCCTGCCCCCACTCCAACGGCCTCAACCCCCTGCCCGCCGAGCGCCTCGGCGATgc                                     >  4:31096/1‑149 (MQ=255)                                                                                                            aCCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATgcg                                    >  1:100048/1‑149 (MQ=255)                                                                                                            aCCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATgcg                                    <  2:28212/149‑1 (MQ=255)                                                                                                               ggCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCg                                 <  3:31096/149‑1 (MQ=255)                                                                                                                  ttCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGc                                          >  6:143090/1‑137 (MQ=255)                                                                                                                  ttCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGc                                          <  5:143090/137‑1 (MQ=255)                                                                                                                      ccGGTGTTCGCCGGCACGCCCGCTCCCACAA‑GCAACCCGAGAACCCACCACCGGAGATGAACTGCCCGACCCACTGGTAATCCCCGGCCCCCACTGCAACGGCCTCAACCCCCTGCCCGCCGAGCGCCTGGGCGAAGCGCCGAAATGCg                          <  4:216510/149‑1 (MQ=255)                                                                                                                       cGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCACCGGCCTCACCCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGaaagg                            >  8:3437/1‑144 (MQ=255)                                                                                                                       cGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATg                            <  7:3437/146‑1 (MQ=255)                                                                                                                        ggTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGt                        <  8:114828/149‑1 (MQ=255)                                                                                                                             tcgcgggcacgcccgctcccacaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTg                   >  2:24374‑M2/24‑149 (MQ=255)                                                                                                                              cgcgggcacgcccgctcccacaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTg                   <  4:128680‑M2/126‑1 (MQ=255)                                                                                                                                      cgcccgctcccacaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGa          <  3:217695‑M2/135‑1 (MQ=255)                                                                                                                                       gcccgctcccacaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGAt         <  7:225872‑M2/136‑1 (MQ=255)                                                                                                                                       gcccgctcccacaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGAt         >  8:121008‑M2/14‑149 (MQ=255)                                                                                                                                               ccacaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGt  >  5:24372‑M2/6‑148 (MQ=255)                                                                                                                                               ccacaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGt  <  6:24372‑M2/143‑1 (MQ=255)                                                                                                                                                 acaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGc                     <  5:45977‑M2/124‑1 (MQ=255)                                                                                                                                                 acaA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGc                     >  6:45977‑M2/4‑127 (MQ=255)                                                                                                                                                    |                                                                                                                                                GACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGA‑TTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAA‑GGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGT  >  NC_002947/5786411‑5786699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.