New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6138046	55 (1.300)	4 (0.100)	4/250	NT	7.8%	coding (501/1254 nt)	czcC	CzcC family metal RND transporter outer membrane protein
	?	NC_002947	= 6138093	41 (1.000)					coding (548/1254 nt)	czcC	CzcC family metal RND transporter outer membrane protein

AAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAGTGGCCGG  >  NC_002947/6137946‑6138239                                                                                                                                                    |                                                                                                                                                   aaGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGAt                                                                                                                                                   >  5:222198‑M2/1‑148 (MQ=255)     gcgcgcCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGccc                                                                                                                                               >  1:188683/1‑149 (MQ=255)         gccgccACGGCACAAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGc                                                                                                                                           >  3:250154/1‑149 (MQ=255)              cACGGCACAAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCg                                                                                                                                      <  6:104788/149‑1 (MQ=255)                   cacaAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCag                                                                                                                                 <  6:44890/149‑1 (MQ=255)                   cacaAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCag                                                                                                                                 <  2:188683/149‑1 (MQ=255)                       aGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCaggagg                                                                                                                             <  2:177630/149‑1 (MQ=255)                        gCCTGGATTACTGCGTACACCCTGCAACGCAAACTGAAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGc                                                                                                                            >  4:48802/1‑149 (MQ=255)                         ccTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCGGGGGCCagggcatc                                                                                                                           <  5:165665/149‑6 (MQ=255)                                   tGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCGGGGGCCagg                                                                                                                                <  3:144586/134‑1 (MQ=255)                                   tGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCGGGGGCCagg                                                                                                                                >  4:144586/1‑134 (MQ=255)                                   tGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTg                                                                                                                  >  2:225817/1‑148 (MQ=255)                                     cGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGcc                                                                                                                                   >  8:10025/1‑129 (MQ=255)                                     cGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGcc                                                                                                                                   <  7:10025/129‑1 (MQ=255)                                       tACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAaga                                                                                                             <  5:74545/149‑1 (MQ=255)                                       tACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAaga                                                                                                             <  4:248929/149‑1 (MQ=255)                                         cacCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAagag                                                                                                            <  1:115583/148‑1 (MQ=255)                                             cTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGaa                                                                                                       <  6:20892/149‑1 (MQ=255)                                                cAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAgg                                                                                                     <  2:245357/148‑1 (MQ=255)                                                  aCGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGAc                                                                                                   >  6:6214/1‑148 (MQ=255)                                                            cagcagTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGa                                                                                         <  4:240050/148‑1 (MQ=255)                                                                 gTTCGAGATGCTGTTGATCGAAAACCGTTTGCTGGCAGCGGCGGTGAGTGCGCTCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGGTGacccagg                                                                                   <  6:172230/149‑1 (MQ=255)                                                                          gCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGacccaggc                                                                                  >  8:205450/1‑141 (MQ=255)                                                                          gCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGacccaggc                                                                                  <  7:205450/141‑1 (MQ=255)                                                                           cTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGacccaggccacccagg                                                                          <  3:48802/148‑1 (MQ=255)                                                                              ttCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCcg                                                                      >  8:147278/1‑149 (MQ=255)                                                                              ttCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCcg                                                                      >  7:66736/1‑149 (MQ=255)                                                                                      aaaCCGTTTGCTGGCAGCCGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCAc                                                              >  8:139196/1‑149 (MQ=255)                                                                                                cTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCt                                                     <  7:65483/148‑1 (MQ=255)                                                                                                cTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTg                                                    >  8:72000/1‑149 (MQ=255)                                                                                                  ggCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGa                                                  >  7:54923/1‑149 (MQ=255)                                                                                                   gCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGAtgccagcaaacggttttcgttgaacagcatgtcgaactgctgcagtttgcgttgcagggtgtacgcagtaatccaggcttgtgccgtggcggcg                                                      >  5:93961‑M2/1‑50 (MQ=255)                                                                                                   gCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGAtgccagcaaacggttttcgttgaacagcatgtcgaactgctgcagtttgcgttgcagggtgtacgcagtaatccaggcttgtgccgtggcggcg                                                      <  6:93961‑M2/144‑95 (MQ=255)                                                                                                       cggcggTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGa                                             <  7:139196/149‑1 (MQ=255)                                                                                                             tgcgtgcgCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGAtgccagcaaacggttttcgttgaacagcatgtcgaactgctgcagtttgcgttgcagggtgtacgcagtaatccaggcttgtgccgtggcggcgcgcactttcaagcgc                                       <  3:65086‑M2/149‑110 (MQ=255)                                                                                                                    gcgcCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATg                                <  7:72000/149‑1 (MQ=255)                                                                                                                     cgcCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATgc                               <  1:225817/149‑1 (MQ=255)                                                                                                                      gcCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATgcg                              >  4:133101/1‑149 (MQ=255)                                                                                                                           gccgccGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGacccaggcc                                                                                 <  4:62761/93‑1 (MQ=255)                                                                                                                           gccgccGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGacccaggcc                                                                                 >  3:62761/1‑93 (MQ=255)                                                                                                                           gccgccGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCaa                           <  3:133101/147‑1 (MQ=255)                                                                                                                             cgccgGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATc                                                <  1:153285/124‑1 (MQ=255)                                                                                                                             cgccgGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATc                                                >  2:153285/1‑124 (MQ=255)                                                                                                                               ccgGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCg                     <  5:6214/149‑1 (MQ=255)                                                                                                                                    ggcggcGCTTCCGCCGAtgccagcaaacggttttcgttgaacagcatgtcgaactgctgcagtttgcgttgcagggtgtacgcagtaatccaggcttgtgccgtggcggcgcgcactttcaagcgctcaaacagtgcttcggcatccgc                >  4:65086‑M2/1‑17 (MQ=255)                                                                                                                                           cTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAg         >  8:36903/1‑149 (MQ=255)                                                                                                                                            ttCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAGt        >  7:235644/1‑149 (MQ=255)                                                                                                                                               cgccgATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAGTgg      <  7:147278/148‑1 (MQ=255)                                                                                                                                                 ccgATGGCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATTCGCAAGCGCCGGCATTTCCGCAGTGGCCg   <  4:250154/149‑1 (MQ=255)                                                                                                                                                 ccgATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCAttt               <  6:236638/137‑1 (MQ=255)                                                                                                                                                 ccgATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACACAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCAttt               >  5:236638/1‑137 (MQ=255)                                                                                                                                                  cgATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAGTGGCCgg  >  7:131679/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   AAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGCAACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAGTGGCCGG  >  NC_002947/6137946‑6138239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.