Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,390,432 C→A 9.2% intergenic (+521/‑201) PP_4738 → / → PP_mr56 hypothetical protein/C4 ncRNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,390,4320CA 9.2% 184.2 / 8.8 65intergenic (+521/‑201)PP_4738/PP_mr56hypothetical protein/C4 ncRNA
Reads supporting (aligned to +/- strand):  ref base C (32/27);  new base A (4/2);  total (36/29)
Fisher's exact test for biased strand distribution p-value = 6.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.15e-01

ACAACTCATCCAAAGCACCCTGCCCGTCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGTCTCGGTGGGT  >  NC_002947/5390286‑5390577
                                                                                                                                                   |                                                                                                                                                  
acaACTCATCCAAAGCACCCTGCCCGTCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCgg                                                                                                                                                  <  2:228577/149‑1 (MQ=255)
  aaCTCATCCAAAGCACCCTGCCCGTCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGc                                                                                                                                                <  8:248498/149‑1 (MQ=255)
     tCATCCAAAGCACCCTGCCCGTCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTc                                                                                                                                             >  5:149638/1‑149 (MQ=255)
        tCCAAAGCACCCTGCCCGTCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCttt                                                                                                                                          >  1:224067/1‑149 (MQ=255)
           aaaGCATCCTGCCCGTCGGGCGGCTGCGGATTAATATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAATACTGGCGGACGGGGGTTCAAATCCCCCCGGATCCACCAAATCCAAAGAAGAACACGCCCTCGGGCGTCttttt                                                                                                                                        >  1:36957/1‑149 (MQ=255)
            aaGCACCCTGCCCGTCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCttttttt                                                                                                                                      <  7:243544/149‑1 (MQ=255)
              gCACCCTGCCCGTCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTt‑gt                                                                                                                                   <  2:129292/149‑1 (MQ=255)
                       ccGTCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAAt                                                                                                                          >  6:16150/1‑149 (MQ=255)
                        cGTCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCGAGGGCGTcttctt                                                                                                                                        >  1:113619/1‑135 (MQ=255)
                        cGTCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCGAGGGCGTcttctt                                                                                                                                        <  2:113619/135‑1 (MQ=255)
                          tCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTg                                                                                                                       <  5:155976/149‑1 (MQ=255)
                                     cGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCgg                                                                                                             <  7:122491/148‑1 (MQ=255)
                                            a‑aTCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTTGGCGCTGCGGGTCGaaa                                                                                                      >  7:212134/1‑148 (MQ=255)
                                               tCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAAt                                                                                                   >  7:232572/1‑149 (MQ=255)
                                                 aGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCg                                                                                                 >  6:176374/1‑149 (MQ=255)
                                                 aGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCGTTTTTT‑GTGGCGGGAATTTGGGCGCGGCGGGGCGAAAAATCg                                                                                                 >  4:134526/1‑149 (MQ=255)
                                                  gTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCgg                                                                                                <  3:134526/149‑1 (MQ=255)
                                                  gTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCgg                                                                                                <  5:176374/149‑1 (MQ=255)
                                                   tAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGa                                                                                               >  6:138149/1‑149 (MQ=255)
                                                          ggCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAATAAGACGCACTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAAcc                                                                                        <  3:46233/149‑1 (MQ=255)
                                                                  aTGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCtt                                                                                >  7:176555/1‑149 (MQ=255)
                                                                     tagtaCCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGa                                                                                                                            <  4:179891/102‑1 (MQ=255)
                                                                             aCAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGttt                                                                     <  6:37264/149‑1 (MQ=255)
                                                                                  ggAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCa                                                                 >  1:264212/1‑148 (MQ=255)
                                                                                        cTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCaaa                                                               <  2:26384/144‑1 (MQ=255)
                                                                                        cTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCaaa                                                               >  1:26384/1‑144 (MQ=255)
                                                                                        cTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATAc                                                          >  7:249308/1‑149 (MQ=255)
                                                                                         tGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGACCTCGGGCGTCTATTTTT‑TTGGCGGGAATTTGGGCGGTTCCGGTCGCTAAATCGGTTTTAACCCCGGTATTGTATGGCGTTTAACaaataaac                                                          >  8:86325/1‑143 (MQ=255)
                                                                                           gCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATActgc                                                       >  2:48423/1‑149 (MQ=255)
                                                                                           gCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATActgc                                                       >  7:195775/1‑149 (MQ=255)
                                                                                           gCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATActgc                                                       <  8:249308/149‑1 (MQ=255)
                                                                                              gACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATActgcctg                                                    <  2:224067/149‑1 (MQ=255)
                                                                                                   gggTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCt                                               <  6:149638/149‑1 (MQ=255)
                                                                                                    ggTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTg                                              <  5:138149/149‑1 (MQ=255)
                                                                                                     gTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTTACAGCCTGGAATTTTGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTATTGTAGGGCGTTTGCCAAAGATACTGCCTGCGCCTg                                              >  1:77228/1‑149 (MQ=255)
                                                                                                               ccccGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGc                                   >  2:53047/1‑149 (MQ=255)
                                                                                                                  cGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGt                                >  4:72898/1‑149 (MQ=255)
                                                                                                                      tCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCAtt                            >  3:194622/1‑149 (MQ=255)
                                                                                                                        caccaAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCAtt                            <  4:194622/147‑1 (MQ=255)
                                                                                                                        caccaAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGCCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCAGCGCCTGattt                                          >  4:171417/1‑133 (MQ=255)
                                                                                                                        caccaAATCCAAA‑AA‑AAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCAttttt                         >  6:126392/1‑148 (MQ=255)
                                                                                                                          ccaAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCAttttt                         >  5:236190/1‑148 (MQ=255)
                                                                                                                           caAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCAttt                           >  5:150832/1‑145 (MQ=255)
                                                                                                                           caAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCAttt                           <  6:150832/145‑1 (MQ=255)
                                                                                                                            aactCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTTCCTGTAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCa                      <  7:86325/146‑1 (MQ=255)
                                                                                                                            aaaTCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCa                      <  5:16150/149‑1 (MQ=255)
                                                                                                                             aaTCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAg                     <  8:195775/149‑1 (MQ=255)
                                                                                                                                 cAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGGCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTATGGCGTTTGCCAAAGCTAATGCCCGCGCCTGTTTTCCCTTGCGGGCATTTTTTCAGGGtt                 >  3:148111/1‑149 (MQ=255)
                                                                                                                                  aaaGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATActgc                                                       >  6:111084/1‑110 (MQ=255)
                                                                                                                                  aaaGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATActgc                                                       <  5:111084/110‑1 (MQ=255)
                                                                                                                                  aaaGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGttt                >  6:67064/1‑149 (MQ=255)
                                                                                                                                    agaagaagaCGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTATTGTAGGGCGTTTCCCAAATATAATGCCTGCGCCTGTTTTCCGTTGCGGTACTTTTTTCAGGGTTTTa              >  6:259381/1‑149 (MQ=255)
                                                                                                                                    aaaaaaagaCGCCCGAGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCg                                  >  6:182453/6‑129 (MQ=255)
                                                                                                                                    aaaaaaagaCGCCCGAGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCg                                  <  5:182453/124‑1 (MQ=255)
                                                                                                                                        gaagaCGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGtct          <  8:212134/149‑1 (MQ=255)
                                                                                                                                        aaagaCGCCCGAGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGtct          >  4:143172/2‑149 (MQ=255)
                                                                                                                                        aaagaCGCCCGAGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGtct          >  1:198946/2‑149 (MQ=255)
                                                                                                                                          agaCGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGTCTCg        <  5:126392/149‑1 (MQ=255)
                                                                                                                                           gaCGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCGTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGTCTCgg       >  2:43035/1‑149 (MQ=255)
                                                                                                                                           gaCGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGTCTCgg       >  6:76270/1‑149 (MQ=255)
                                                                                                                                            aCGCCCTCGGGCGTCTTTTTTT‑GTGCCTTGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGTCTCGGt      <  5:259381/149‑1 (MQ=255)
                                                                                                                                              gCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGTCTCGGTgg    <  2:264212/149‑1 (MQ=255)
                                                                                                                                              gCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGTCTCGGTgg    <  8:232572/149‑1 (MQ=255)
                                                                                                                                              gCCATCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAAACCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGTCTCGGTgg    >  7:170214/1‑149 (MQ=255)
                                                                                                                                                ccTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGTCTCGGTGGGt  >  1:2320/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
ACAACTCATCCAAAGCACCCTGCCCGTCGGGCGGCTGCGGATTAA‑ATCAGTAGACACGGCTAAGCATGTAGTACCGACAGCGGAGTACTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCAAATCCAAAGAAGAAGACGCCCTCGGGCGTCTTTTTTT‑GTGCCTGGAATTTGGGCGCTGCGGGTCGAAAAATCGGATTTAACCCCTTTCTTGTAGGGCGTTTCCCAAAGATACTGCCTGCGCCTGTTTTCCGTTGCGGTCATTTTTTCAGGGTTTTAGTCTCGGTGGGT  >  NC_002947/5390286‑5390577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑