| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,509,454 | G→C | 5.5% | G353G (GGG→GGC) | urtA → | urea ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,509,454 | 0 | G | C | 5.5% | 232.4 / 3.7 | 73 | G353G (GGG→GGC) | urtA | urea ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (30/38); new base C (2/2); total (33/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.54e-01 | |||||||||||
CGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCAG > NC_002947/5509307‑5509598 | cGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCggg < 6:183451/148‑1 (MQ=255)cGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGACGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGACCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCggg > 5:235714/1‑148 (MQ=255) caaggccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCa > 5:148807/1‑147 (MQ=255) gccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCtt > 2:220010/1‑149 (MQ=255) caaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGCTCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTc < 1:199210/149‑1 (MQ=255) caaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCTCTGCCCGGCCAGTGCTTCg < 6:156387/149‑1 (MQ=255) cTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGcc > 4:213559/1‑149 (MQ=255) cAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCTTCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCg < 1:220010/149‑1 (MQ=255) cAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCg < 5:121986/149‑1 (MQ=255) gTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGc < 1:150175/149‑1 (MQ=255) gTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGc < 3:213559/149‑1 (MQ=255) gTGCCGACAAGGCCGTGACCAAAGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGc > 7:167458/1‑149 (MQ=255) ccGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCtt > 5:265315/1‑148 (MQ=255) aCAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCAcc > 7:61674/1‑149 (MQ=255) ggCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGa > 8:238139/1‑126 (MQ=255) ggCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGa < 7:238139/126‑1 (MQ=255) gCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAg < 1:116989/126‑1 (MQ=255) gCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAg > 2:116989/1‑126 (MQ=255) gCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGAc < 6:265315/149‑1 (MQ=255) cAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGAc > 2:168207/1‑148 (MQ=255) cAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGAc > 2:31214/1‑148 (MQ=255) aaCGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACaa < 7:9020/149‑1 (MQ=255) cGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGa < 1:31214/149‑1 (MQ=255) gACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGac < 1:168207/149‑1 (MQ=255) gACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGac > 7:223695/1‑149 (MQ=255) cccATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGaccaa > 6:272775/1‑149 (MQ=255) cATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGa < 8:19420/131‑1 (MQ=255) cATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGa > 7:19420/1‑131 (MQ=255) aTGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGaccaacca > 4:250164/1‑149 (MQ=255) aaGACACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCAAAG‑TCCACTGACGTTGAAAAGGTCC‑GCGAAGCACTGGCCGGTCAGAGCTTCGAGTCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAaccaccac > 2:178064/1‑149 (MQ=255) aGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAaccaccacc > 6:238541/1‑149 (MQ=255) aGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTAAAGAAAGCCAAG‑TCCACTAACGTTGACAAGGTCC‑GCAAAGCACTGGCCGGGAAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAaccaccacc > 7:40148/1‑149 (MQ=255) ccACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTg < 3:11286/149‑1 (MQ=255) cACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGc < 8:61674/149‑1 (MQ=255) cGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACaa < 8:223695/147‑1 (MQ=255) gTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGcc > 2:94958/1‑149 (MQ=255) ggCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCgg < 4:219390/148‑1 (MQ=255) ggCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCgg < 5:272775/148‑1 (MQ=255) ggCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGt < 5:238541/149‑1 (MQ=255) gCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtg < 1:86125/149‑1 (MQ=255) gCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtg < 1:108801/149‑1 (MQ=255) gCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtg < 1:185090/149‑1 (MQ=255) cATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtga > 6:258511/1‑149 (MQ=255) cacaTGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtgatga < 3:95811/148‑1 (MQ=255) acaTGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCgg > 3:228980/1‑93 (MQ=255) acaTGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCgg < 4:228980/93‑1 (MQ=255) acaTGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATc > 6:64492/1‑149 (MQ=255) ggCCCAGGCTGTCGAGAAAGCCAAG‑TCCTCTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCgaga < 6:257999/149‑1 (MQ=255) ccAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCgg < 1:247265/131‑1 (MQ=255) ccAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCgg > 2:247265/1‑131 (MQ=255) cAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTc > 7:85868/1‑69 (MQ=255) cAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTc < 8:85868/69‑1 (MQ=255) aGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAg < 1:190957/149‑1 (MQ=255) cGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGCGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACg > 3:32015/1‑149 (MQ=255) gagaAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACgg > 1:50797/1‑149 (MQ=255) gaAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGcc < 5:258511/149‑1 (MQ=255) aaaGCAAAG‑TCCACTTACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGTCGGTGATGATCGGCGAGATTCAGGATGACGGCCa < 8:40148/149‑1 (MQ=255) aaG‑TCCACTGACGTTGACAAGGTCCGGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGa > 1:140433/1‑89 (MQ=255) aaG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGa < 2:140433/88‑1 (MQ=255) aaG‑TCCACTGACGTTGAAAAGGTCC‑GCTAAGCACTGGCCGGGCATAGCTTGGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAg < 8:167458/149‑1 (MQ=255) g‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCg > 3:248147/1‑149 (MQ=255) cACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCgtgg > 4:7892/1‑149 (MQ=255) aCGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTgg < 1:94958/149‑1 (MQ=255) cGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTgg < 2:50797/148‑1 (MQ=255) gACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGaaa < 5:164794/148‑1 (MQ=255) gACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAAc > 4:115841/1‑149 (MQ=255) aCAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCgtggt > 8:189581/1‑139 (MQ=255) aCAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCgtggt < 7:189581/139‑1 (MQ=255) gTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGagca < 4:32015/149‑1 (MQ=255) tCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAg > 3:127864/1‑110 (MQ=255) ctcgAAGCTCTGCCCGGCCAGTGCTTCGCGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGcc > 6:164551/3‑149 (MQ=255) ctcgAAGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCCCAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGcc > 8:185549/3‑149 (MQ=255) aGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGc < 3:250164/149‑1 (MQ=255) cACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCgg < 1:178064/149‑1 (MQ=255) ccGGCCAGTGCTTCGCGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCAg < 5:164551/149‑1 (MQ=255) | CGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAG‑TCCACTGACGTTGACAAGGTCC‑GCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCAG > NC_002947/5509307‑5509598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |