Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,562,937	A→C	7.0%	intergenic (‑53/+8)	hflK ← / ← hflX	integral membrane ATP‑dependent zinc metallopeptidase/GTPase HflX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,562,937	0	A	C	7.0%	170.4 / 2.6	56	intergenic (‑53/+8)	hflK/hflX	integral membrane ATP‑dependent zinc metallopeptidase/GTPase HflX
Reads supporting (aligned to +/- strand):  ref base A (23/29);  new base C (2/2);  total (25/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01

GCGGCGGCCGCCCCAGGGATCCTGATTGTTCGAGTTGCCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTTCATCATGCTCTTCACTC  >  NC_002947/5562789‑5563074                                                                                                                                                      |                                                                                                                                          gcggcgGCCGCCCCAGGGATCCTCATTGTTCCAGTTGCCACCCGGCTCTTTCCATGCCATAGCGCTCTCCATCTCATAACGCAACCCCGCG‑CCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTcgac                                                                                                                                          <  6:101240/149‑1 (MQ=255)       gccgccCCAGGGATCCTGATTGTTCGAGTTGCCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGCCCTCGCCGAGcc                                                                                                                                     >  8:87454/1‑148 (MQ=255)        ccgccCCAGGGATCCTGATTGTTCGAGTTGCCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCAt                                                                                                                                    <  6:204070/149‑1 (MQ=255)          gccCCAGGGATCCTGATTGTTCGAGTTGCCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCTCGTCGAGGTCGCCGGGCagca                                                                                                                                  <  5:139181/149‑4 (MQ=255)            cccAGGGATCCTGATTGTTCGAGTTGCCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCTCGTCGAGGTCGCCGGGCagcag                                                                                                                                 <  1:216386/148‑5 (MQ=255)            cccAGGGATCCTGATTGTTCGAGTTGCCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCTCGTCGAGGTCGCCGGGCagcag                                                                                                                                 >  2:216386/1‑144 (MQ=255)             ccAGGGATCCTGATTGTTCGAGTTGTCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCTCACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTAt                                                                                                                                <  1:59891/149‑1 (MQ=255)                       tGATTGTTCGAGTTGCCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTcga                                                                                                                                           >  3:108722/1‑127 (MQ=255)                       tGATTGTTCGAGTTGCCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTcga                                                                                                                                           <  4:108722/127‑1 (MQ=255)                         aTTGTGCGAGCTGCCACCCGGCTCGAGCCAAGCCAGAGCGCTCTCCATCTGATAAAGCAAACACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTAATGCAAAGTGTGtt                                                                                                                   <  8:66487/149‑1 (MQ=255)                                gAGTTGCCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGa                                                                                                             >  6:266778/1‑148 (MQ=255)                                   ttGCCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACaaa                                                                                                         <  7:219276/149‑1 (MQ=255)                                        aCCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACtt                                                                                                    >  1:152289/1‑149 (MQ=255)                                         cccGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTg                                                                                                   >  3:119080/1‑149 (MQ=255)                                              cTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCt                                                                                              >  3:83727/1‑149 (MQ=255)                                                     cAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGcc                                                                                       <  5:192166/149‑1 (MQ=255)                                                          cATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTcgc                                                                                  >  8:87882/1‑149 (MQ=255)                                                            tAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCgg                                                                                <  2:141617/149‑1 (MQ=255)                                                                     ccATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCAt                                                                                          <  6:186866/130‑1 (MQ=255)                                                                     ccATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCAt                                                                                          >  5:186866/1‑130 (MQ=255)                                                                      cATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGc                                                                      >  5:110937/1‑149 (MQ=255)                                                                       aTCTGATAAAGCAAAGACGCGCCCACGGCGAGCCGTACAATGCT‑ACAGAATGCCTGTCACTGCTGCCCCGCGACCTCGACGAGCATTTATTGCAAATTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGc                                                                      >  2:204779/1‑148 (MQ=255)                                                                        tCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGa                                                                    >  2:1213/1‑149 (MQ=255)                                                                          tGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGAtt                                                                  <  7:87882/149‑1 (MQ=255)                                                                               aaGCAAAGACGCGCCCACGTGGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACGTCGACGATCATTTATTGCAATGTGTGTTGCTTTACAAACTCTTGCGGCTCCATGCCTTCGCGGCTGTCCAGGCGATTCAGtt                                                             <  6:19525/149‑1 (MQ=255)                                                                               aaGCAAAGACGCGCCCACGGCGCTCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGtt                                                             <  2:44987/149‑1 (MQ=255)                                                                                aacAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTc                                                            >  6:36670/3‑149 (MQ=255)                                                                                  cAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGa                                                          <  1:252453/149‑1 (MQ=255)                                                                                  cAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGa                                                          <  2:203962/149‑1 (MQ=255)                                                                                  cAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGa                                                          <  1:256449/149‑1 (MQ=255)                                                                                         gcgcCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATggg                                                   <  2:152289/149‑1 (MQ=255)                                                                                         gcgcCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATggg                                                   <  6:110937/149‑1 (MQ=255)                                                                                                  gcgcgcCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCAc                                          <  1:186026/149‑1 (MQ=255)                                                                                                   cgcgcCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACg                                         <  4:119080/149‑1 (MQ=255)                                                                                                      gcCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTc                                      <  1:1213/149‑1 (MQ=255)                                                                                                         gTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAg                                                <  5:141927/136‑1 (MQ=255)                                                                                                         gTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAg                                                >  6:141927/1‑136 (MQ=255)                                                                                                          tCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTcag                                    >  7:78609/1‑147 (MQ=255)                                                                                                            cAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTcagcag                                 <  1:177895/148‑1 (MQ=255)                                                                                                            cAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAgg                                >  6:247492/1‑149 (MQ=255)                                                                                                            cAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAgg                                >  2:47143/1‑149 (MQ=255)                                                                                                                  t‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTgcgc                          >  3:214953/1‑149 (MQ=255)                                                                                                                     cAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGccc                        >  3:132777/1‑149 (MQ=255)                                                                                                                      aGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCct                       >  8:89825/1‑149 (MQ=255)                                                                                                                       gAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCctt                      <  4:83727/149‑1 (MQ=255)                                                                                                                          tGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCcttctt                   >  5:20624/1‑149 (MQ=255)                                                                                                                             cTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTtca                 >  7:52727/1‑148 (MQ=255)                                                                                                                               gTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACACTCAGCAGGCTGCGCCCTTCTtcatca              >  7:239091/1‑149 (MQ=255)                                                                                                                                tCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTtcatc               <  8:52727/147‑1 (MQ=255)                                                                                                                                tCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTtcatc               <  5:266778/147‑1 (MQ=255)                                                                                                                                 cACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTTCATCATg            <  7:89825/149‑1 (MQ=255)                                                                                                                                    tgctgcCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTTGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTTCATCATGctc         >  1:60135/1‑149 (MQ=255)                                                                                                                                      ctgcCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTTCATCATGCTCtt       <  1:47143/149‑1 (MQ=255)                                                                                                                                      ctgcCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTTCATCATGCTCtt       <  5:247492/149‑1 (MQ=255)                                                                                                                                         cccGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTTCATCATGCTCTTCa     <  5:36670/148‑1 (MQ=255)                                                                                                                                           cGGCGCCCTCGATGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTTCATCATGCTCTTCActc  >  8:223308/1‑149 (MQ=255)                                                                                                                                           cGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTTCATCATGCTCTTCActc  <  3:197751/149‑1 (MQ=255)                                                                                                                                                  cTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTTCATCATGCTCTTCa     <  7:36330/139‑1 (MQ=255)                                                                                                                                                  cTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTTCATCATGCTCTTCa     >  8:36330/1‑139 (MQ=255)                                                                                                                                                      |                                                                                                                                          GCGGCGGCCGCCCCAGGGATCCTGATTGTTCGAGTTGCCACCCGGCTCGTTCCAAGCCATAGCGCTCTCCATCTGATAAAGCAAAGACGCGCCCACGGCGCGCCGTCCAATGCT‑ACAGAATGCCTGTCACTGCTGCCCGGCGACCTCGACGAGCATTTATTGCAAAGTGTGTTGCTGGACAAACACTTGCGGCTCCATGCCTTCGCGGCTGACCAGGCGATTCAGTTCGACCATGGGCAGTCGCACGCTCAGCAGGCTGCGCCCTTCTTCATCATGCTCTTCACTC  >  NC_002947/5562789‑5563074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑