Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,988,819 T→C 27.3% intergenic (+113/‑433) kefB‑III → / → PP_mr64 glutathione‑regulated potassium/H+ antiporter/C4 ncRNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,988,8190TC27.3% 91.6 / 33.8 55intergenic (+113/‑433)kefB‑III/PP_mr64glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
Reads supporting (aligned to +/- strand):  ref base T (16/24);  new base C (7/8);  total (23/32)
Fisher's exact test for biased strand distribution p-value = 7.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGA  >  NC_002947/5988680‑5988965
                                                                                                                                                 |                                                                                                                                                  
ggaggtgttcgccgggtgattttcagcgccggggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCgggattt                                                                                                                                             <  1:247450‑M2/62‑4 (MQ=255)
cGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGAcgcg                                                                                                                                            >  6:116761/1‑148 (MQ=255)
      tttGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGa                                                                                                                                     <  8:142428/149‑1 (MQ=255)
        tGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAg                                                                                                                                    <  5:116761/148‑1 (MQ=255)
         gATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCATACGT‑‑TTGTTTCGGGCAAGTTATTCCTGTGGGACGAGCACGCGAGcc                                                                                                                                  >  8:103797/1‑149 (MQ=255)
                    tttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGcat                                                                                                                       >  6:95135‑M2/66‑148 (MQ=255)
                       cagcgcctgggaggtgttcggcgggagagtttcagcgcctgggagatcgagggccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGggcatgt                                                                                                                     <  5:52476‑M2/86‑4 (MQ=255)
                       cagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGgggcatgtc                                                                                                                    >  7:215317‑M2/63‑145 (MQ=255)
                        tGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCt                                                                                                                   >  3:77571/1‑149 (MQ=255)
                        agcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGgggcatgtc                                                                                                                    <  8:215317‑M2/87‑5 (MQ=255)
                          aGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTc                                                                                                                  >  7:72836/1‑148 (MQ=255)
                          aGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTc                                                                                                                  >  3:48643/1‑148 (MQ=255)
                           ggCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGa                                                                                                                <  4:76036/149‑1 (MQ=255)
                           ggCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGACAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGa                                                                                                                >  2:185356/1‑149 (MQ=255)
                                 gaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATcgc                                                                                                          <  5:95135‑M2/97‑1 (MQ=255)
                                  gggccatcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATcgcg                                                                                                         <  4:33330‑M2/98‑1 (MQ=255)
                                    gtgttcggcgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGcgtc                                                                                                       <  6:102326‑M2/100‑1 (MQ=255)
                                    gtgttcgccgggagagtttcagcgcctgggagagcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGcgt                                                                                                        <  1:263808‑M2/99‑1 (MQ=255)
                                    gcgcGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc                                                                                                       <  4:77571/149‑1 (MQ=255)
                                     cgcgTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtcg                                                                                                      >  3:258922/1‑149 (MQ=255)
                                      gcgTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGgc                                                                                                                           >  2:258125/1‑127 (MQ=255)
                                      gcgTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGgc                                                                                                                           <  1:258125/127‑1 (MQ=255)
                                          gCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTaca                                                                                                  >  7:33643/1‑148 (MQ=255)
                                           ccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTacaaa                                                                                                <  7:37460‑M2/107‑1 (MQ=255)
                                               gAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTacaaaca                                                                                              <  8:72836/147‑1 (MQ=255)
                                                 gggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGc                                                                                          <  3:134500/149‑1 (MQ=255)
                                                  ggTTGTAGAGCGTGTGAGATTGTGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCCCATCTCCTACGTCCTCATTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTacaaa                                                                                                <  1:84046/148‑1 (MQ=25)
                                                     tGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTc                                                                                      <  6:75656/149‑1 (MQ=255)
                                                      gTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTc                                                                                      <  4:258922/148‑1 (MQ=255)
                                                         gTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc                                                                                                            >  4:174209/1‑123 (MQ=255)
                                                         gTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTcgcgc                                                                                  >  1:31127/1‑149 (MQ=255)
                                                                    aTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGcac                                                                       <  4:48643/149‑1 (MQ=255)
                                                                         gcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc                                                                                                       <  5:121405‑M2/100‑1 (MQ=255)
                                                                         gcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc                                                                                                       >  6:121405‑M2/13‑112 (MQ=255)
                                                                         gcgcCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCaggag                                                                  >  5:247235/1‑149 (MQ=14)
                                                                                ccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAg                                                                                            >  4:249155‑M2/6‑116 (MQ=255)
                                                                                ccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAg                                                                                            <  3:249155‑M2/111‑1 (MQ=255)
                                                                                 cgcgcgGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGTCTGGc                                                          >  3:3442/1‑149 (MQ=14)
                                                                                 cgcgCGGCGATTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACTCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGc                                                          <  1:185356‑M2/145‑1 (MQ=255)
                                                                                       gcgcTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaa                                                    <  7:103797/149‑1 (MQ=255)
                                                                                           ttCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaacaaa                                                <  8:33643/149‑1 (MQ=255)
                                                                                           ttCGCGGGTAAACCC‑‑‑GCTCCTACCT‑‑TTGTTTCGGGCCAGTTATTACTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTAGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaacaaa                                                >  6:240718/1‑149 (MQ=255)
                                                                                             cgcgGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaacaaac                                               <  2:53419/148‑1 (MQ=255)
                                                                                               cgGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTa                                            <  2:31127/149‑1 (MQ=255)
                                                                                                      aCCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCgg                                     >  6:245598/1‑149 (MQ=255)
                                                                                                         c‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGtt                                  <  6:72185/149‑1 (MQ=255)
                                                                                                                 cTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTAGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCCGaaacaaac                                               >  3:201883/1‑130 (MQ=2)
                                                                                                                     gt‑‑ttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcg                          <  8:64077‑M2/148‑7 (MQ=255)
                                                                                                                           tgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGTACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagc                      <  8:124034‑M2/149‑11 (MQ=255)
                                                                                                                             tttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGAACTGGCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGcgcc                   >  7:139244/1‑149 (MQ=14)
                                                                                                                               tCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACACGGCGGTCGCGCGCGCCTGGCACTGGAGGGATTGGCCATAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgcc                   >  8:56030‑M2/1‑135 (MQ=255)
                                                                                                                                   gCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcg              <  3:24111‑M2/149‑19 (MQ=255)
                                                                                                                                   gCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgg             >  3:104530/1‑149 (MQ=14)
                                                                                                                                              cTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctc    <  4:15247‑M2/148‑29 (MQ=255)
                                                                                                                                              cTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctc    <  1:124560‑M2/148‑29 (MQ=255)
                                                                                                                                                 tgGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcga  >  4:24111‑M2/1‑117 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
CGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGA  >  NC_002947/5988680‑5988965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: