Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,988,844 C→G 22.7% intergenic (+138/‑408) kefB‑III → / → PP_mr64 glutathione‑regulated potassium/H+ antiporter/C4 ncRNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,988,8440CG22.7% 111.6 / 29.1 53intergenic (+138/‑408)kefB‑III/PP_mr64glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
Reads supporting (aligned to +/- strand):  ref base C (17/24);  new base G (7/5);  total (24/29)
Fisher's exact test for biased strand distribution p-value = 3.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.19e-01

GGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATC  >  NC_002947/5988700‑5988989
                                                                                                                                                      |                                                                                                                                                 
tttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGcat                                                                                                                                               >  6:95135‑M2/66‑148 (MQ=255)
   cagcgcctgggaggtgttcggcgggagagtttcagcgcctgggagatcgagggccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGggcatgt                                                                                                                                             <  5:52476‑M2/86‑4 (MQ=255)
   cagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGgggcatgtc                                                                                                                                            >  7:215317‑M2/63‑145 (MQ=255)
    tGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCt                                                                                                                                           >  3:77571/1‑149 (MQ=255)
    agcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGgggcatgtc                                                                                                                                            <  8:215317‑M2/87‑5 (MQ=255)
      aGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTc                                                                                                                                          >  7:72836/1‑148 (MQ=255)
      aGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTc                                                                                                                                          >  3:48643/1‑148 (MQ=255)
       ggCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGa                                                                                                                                        <  4:76036/149‑1 (MQ=255)
       ggCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGACAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGa                                                                                                                                        >  2:185356/1‑149 (MQ=255)
             gaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATcgc                                                                                                                                  <  5:95135‑M2/97‑1 (MQ=255)
              gggccatcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATcgcg                                                                                                                                 <  4:33330‑M2/98‑1 (MQ=255)
                gtgttcggcgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGcgtc                                                                                                                               <  6:102326‑M2/100‑1 (MQ=255)
                gtgttcgccgggagagtttcagcgcctgggagagcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGcgt                                                                                                                                <  1:263808‑M2/99‑1 (MQ=255)
                gcgcGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc                                                                                                                               <  4:77571/149‑1 (MQ=255)
                 cgcgTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtcg                                                                                                                              >  3:258922/1‑149 (MQ=255)
                  gcgTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGgc                                                                                                                                                   >  2:258125/1‑127 (MQ=255)
                  gcgTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGgc                                                                                                                                                   <  1:258125/127‑1 (MQ=255)
                      gCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTaca                                                                                                                          >  7:33643/1‑148 (MQ=255)
                       ccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTacaaa                                                                                                                        <  7:37460‑M2/107‑1 (MQ=255)
                           gAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTacaaaca                                                                                                                      <  8:72836/147‑1 (MQ=255)
                             gggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGc                                                                                                                  <  3:134500/149‑1 (MQ=255)
                              ggTTGTAGAGCGTGTGAGATTGTGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCCCATCTCCTACGTCCTCATTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTacaaa                                                                                                                        <  1:84046/148‑1 (MQ=25)
                                 tGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTc                                                                                                              <  6:75656/149‑1 (MQ=255)
                                  gTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTc                                                                                                              <  4:258922/148‑1 (MQ=255)
                                     gTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc                                                                                                                                    >  4:174209/1‑123 (MQ=255)
                                     gTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTcgcgc                                                                                                          >  1:31127/1‑149 (MQ=255)
                                                aTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGcac                                                                                               <  4:48643/149‑1 (MQ=255)
                                                     gcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc                                                                                                                               >  6:121405‑M2/13‑112 (MQ=255)
                                                     gcgccgcccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc                                                                                                                               <  5:121405‑M2/100‑1 (MQ=255)
                                                     gcgcCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCaggag                                                                                          >  5:247235/1‑149 (MQ=14)
                                                            ccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAg                                                                                                                    <  3:249155‑M2/111‑1 (MQ=255)
                                                            ccgcgCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAg                                                                                                                    >  4:249155‑M2/6‑116 (MQ=255)
                                                             cgcgcgGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGTCTGGc                                                                                  >  3:3442/1‑149 (MQ=14)
                                                             cgcgCGGCGATTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACTCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGc                                                                                  <  1:185356‑M2/145‑1 (MQ=255)
                                                                   gcgcTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaa                                                                            <  7:103797/149‑1 (MQ=255)
                                                                       ttCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaacaaa                                                                        <  8:33643/149‑1 (MQ=255)
                                                                       ttCGCGGGTAAACCC‑‑‑GCTCCTACCT‑‑TTGTTTCGGGCCAGTTATTACTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTAGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaacaaa                                                                        >  6:240718/1‑149 (MQ=255)
                                                                         cgcgGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaacaaac                                                                       <  2:53419/148‑1 (MQ=255)
                                                                           cgGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTa                                                                    <  2:31127/149‑1 (MQ=255)
                                                                                  aCCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCgg                                                             >  6:245598/1‑149 (MQ=255)
                                                                                     c‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGtt                                                          <  6:72185/149‑1 (MQ=255)
                                                                                             cTACGT‑‑TTGTTTCGGGCCAATTATTCCTGCGGGATTAGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCCGaaacaaac                                                                       >  3:201883/1‑130 (MQ=2)
                                                                                                 gt‑‑ttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcg                                                  <  8:64077‑M2/148‑7 (MQ=255)
                                                                                                       tgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGTACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagc                                              <  8:124034‑M2/149‑11 (MQ=255)
                                                                                                         tttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGAACTGGCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGcgcc                                           >  7:139244/1‑149 (MQ=14)
                                                                                                           tCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACACGGCGGTCGCGCGCGCCTGGCACTGGAGGGATTGGCCATAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgcc                                           >  8:56030‑M2/1‑135 (MQ=255)
                                                                                                               gCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcg                                      <  3:24111‑M2/149‑19 (MQ=255)
                                                                                                               gCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgg                                     >  3:104530/1‑149 (MQ=14)
                                                                                                                          cTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctc                            <  1:124560‑M2/148‑29 (MQ=255)
                                                                                                                          cTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctc                            <  4:15247‑M2/148‑29 (MQ=255)
                                                                                                                             tgGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcga                          >  4:24111‑M2/1‑117 (MQ=255)
                                                                                                                               ggACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAATCAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatct                       <  2:191966‑M2/148‑34 (MQ=255)
                                                                                                                                  cgcgCACGCGAGCCCCCTGGCGGACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATg                   <  3:108838/149‑1 (MQ=255)
                                                                                                                                   gcgcACGCGAGCCCCCTGGCGGACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATg                   >  4:108838/1‑148 (MQ=255)
                                                                                                                                    cgcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgcccaatctcacagg                 >  7:64077‑M2/1‑110 (MQ=255)
                                                                                                                                        cgcgACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCCGAAACAAACGTAg                                                                   >  1:160072/1‑94 (MQ=14)
                                                                                                                                           gAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgat                         >  8:157576‑M2/1‑103 (MQ=255)
                                                                                                                                                cccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACt     <  2:124560/149‑1 (MQ=255)
                                                                                                                                                     gcgcACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATc  <  5:245598/147‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                 
GGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCC‑‑‑GCTCCTACGT‑‑TTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATC  >  NC_002947/5988700‑5988989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: