| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,992,832 | C→T | 5.5% | Q275* (CAG→TAG) | opdB → | proline‑specific outer membrane porin D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,992,832 | 0 | C | T | 5.5% | 223.1 / 2.1 | 74 | Q275* (CAG→TAG) | opdB | proline‑specific outer membrane porin D |
| Reads supporting (aligned to +/- strand): ref base C (33/36); new base T (2/2); total (35/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCACTCGTGGCAACTGCGCTATGAC > NC_002947/5992684‑5992975 | gcgcCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGccc < 7:19504/149‑1 (MQ=255) gcCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAg > 6:161444/1‑149 (MQ=255) cAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCACCGCCGGGGCAATCGCCACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGgc > 8:84171/1‑149 (MQ=255) gCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCt < 2:209302/149‑1 (MQ=255) tCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTg > 6:155643/1‑149 (MQ=255) cctgaacctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGcc > 6:168885/1‑148 (MQ=255) cctgaacctgGACCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGcc > 7:154079/1‑148 (MQ=255) ctgaacctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAACACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGCGCGTGGCCTa > 5:243858/1‑149 (MQ=255) gaacctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTAc < 5:222737/148‑1 (MQ=255) gaacctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTAc > 6:222737/1‑148 (MQ=255) ctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGaa < 5:229966/149‑1 (MQ=255) ccAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTc > 4:89351/1‑148 (MQ=255) ccAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGAAACCCGCAACGCCAGCGCCGGGGCGCTCGACACCCTCGCATACAGCCAGCTGGCCAAGTACACCATAGGCGCCCCGGCGCTGAGCGTGGCCTAACACAAGGTc > 6:48852/1‑148 (MQ=255) cAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGa < 2:163208/149‑1 (MQ=255) aaGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAg < 5:161444/149‑1 (MQ=255) aaGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAg < 7:20641/149‑1 (MQ=255) aGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAgg < 3:244237/149‑1 (MQ=255) aGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAgg < 1:192692/149‑1 (MQ=255) gCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGc > 5:120522/1‑149 (MQ=255) gCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGc < 2:182429/149‑1 (MQ=255) atcTGGCGCGTGGACGGCAACCTGTACAAAACCCGCGATACCTGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGa < 2:252326/147‑1 (MQ=255) aaCTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGCTCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCAGCGCCTGGGCGCCGaag > 4:21771/1‑121 (MQ=255) aaCTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCACAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGa > 1:252326/1‑149 (MQ=255) aaCTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCAGCGCCTGGGCGCCGaag < 3:18308/123‑3 (MQ=255) aaCTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCAGCGCCTGGGCGCCGaag < 3:21771/123‑3 (MQ=255) aaCTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCAGCGCCTGGGCGCCGaag > 4:18308/1‑121 (MQ=255) tGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGacac > 3:72453/1‑149 (MQ=255) cgcCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACAcccc < 5:48852/149‑1 (MQ=255) ccTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGt < 5:155643/149‑1 (MQ=255) gACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTc < 8:229414/147‑1 (MQ=255) cGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACt > 7:32557/1‑149 (MQ=255) cTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTcgg > 4:145157/1‑149 (MQ=255) gTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTcggcg > 1:123869/1‑149 (MQ=255) aaaaCCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGa > 2:109864/1‑149 (MQ=255) cccGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCTCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTcc < 4:244079/149‑1 (MQ=255) cccGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTcc < 8:32557/149‑1 (MQ=255) ccGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTtcgt < 4:162606/135‑1 (MQ=255) ccGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTtcgt > 3:162606/1‑135 (MQ=255) ccGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCa > 5:113058/1‑149 (MQ=255) cgcgATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCAt > 3:167936/1‑149 (MQ=255) cgcgATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCAt < 2:123869/149‑1 (MQ=255) cgcgATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCAt < 5:142597/149‑1 (MQ=255) gcgATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATc < 1:44958/149‑1 (MQ=255) cGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTgg < 4:72453/149‑1 (MQ=255) ggCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGATGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGc > 8:94004/1‑149 (MQ=255) cGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAAcg > 2:137922/1‑149 (MQ=255) ccAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAAcgcg < 3:153555/149‑1 (MQ=255) cAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGa < 7:94004/149‑1 (MQ=255) ccGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAg < 2:42909/149‑1 (MQ=255) cGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCTGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGt < 7:131014/149‑1 (MQ=255) gCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGc < 6:243858/149‑1 (MQ=255) cGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTAc < 5:42081/125‑1 (MQ=255) cGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTAc > 6:42081/1‑125 (MQ=255) gACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACtt < 3:145157/149‑1 (MQ=255) ccTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTc > 1:217105/1‑88 (MQ=255) ccTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTc < 2:217105/88‑1 (MQ=255) ccTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACg > 6:88025/1‑149 (MQ=255) tCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGt > 7:71028/1‑132 (MQ=255) tCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGt < 8:71028/132‑1 (MQ=255) tCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGc > 2:129652/1‑149 (MQ=255) tCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGc > 6:184704/1‑149 (MQ=255) ttACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTg > 1:193071/1‑149 (MQ=255) aGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGACAACGCGATGAAGTACGCCGACTTCAACGGCCCTGGc > 7:219806/1‑147 (MQ=255) ctgGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCAc < 1:137922/147‑1 (MQ=255) gCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCACTCGt < 7:84171/148‑1 (MQ=255) cAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGCCTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCCCTCGTgg > 3:188504/1‑148 (MQ=255) aGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCACTCGTGGCAACTgcg > 5:223375/1‑149 (MQ=255) gCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCACTCGTGGCAACTgcgc < 5:168885/149‑1 (MQ=255) cTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCACTCGTGGCAACTGCGCt < 2:193071/149‑1 (MQ=255) ggCGCCGAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAGCGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCACTCGTGGAAACTGCGCTATg < 3:146632/148‑1 (MQ=255) ggCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCACTCGTGGCAACTGCGCTATGa < 8:154079/149‑1 (MQ=255) gcgcCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTcggcg < 3:30436/66‑1 (MQ=255) gcgcCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTcggcg > 4:30436/1‑66 (MQ=255) gcgcCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCTACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCACTCGTGGCAACTGCGCTATGAc < 5:161583/149‑1 (MQ=255) gcgcCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCACTCGTGGCAACTGCGCTATGAc > 6:161583/1‑149 (MQ=255) ccAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCACTCGt < 3:187843/128‑1 (MQ=255) ccAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGAGAGCACTCGt > 4:187843/1‑128 (MQ=255) | GCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGCCAACGCGATCAAGTACGCCGACTTCAACGGCCCTGGCGAGCACTCGTGGCAACTGCGCTATGAC > NC_002947/5992684‑5992975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |