| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,023,160 | T→C | 10.8% | intergenic (+75/+69) | PP_5273 → / ← PP_5274 | oxidoreductase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,023,160 | 0 | T | C | 10.8% | 168.9 / 8.8 | 66 | intergenic (+75/+69) | PP_5273/PP_5274 | oxidoreductase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (27/31); new base C (3/4); total (30/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGGCAAGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCAACTCG > NC_002947/6023015‑6023301 | gcggcAAGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGcc > 3:70533/1‑149 (MQ=255)gcggcAAGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGcc < 5:203803/149‑1 (MQ=255) gcAAGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGt < 2:239733/143‑1 (MQ=255) gcAAGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGt > 1:239733/1‑143 (MQ=255) aGCACCTGCGCTCGCCACTGCTGGCGCTTGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCACGCCCGCT‑cc < 5:238630/149‑1 (MQ=255) ccTGCGCGCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCcaca < 1:127940/149‑1 (MQ=255) cTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAg > 3:213404/1‑149 (MQ=255) gCCACTGCTGGGGGTGGGAATGCTGTGGCTTCGCCTGAAAGAGGTTACTTGAAAGTCCCAATCGTTGTGGCAGCAAGTGTCTTGCTTAAATTCTAATAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCAGCT‑CCCACAGTGTCGGTg < 8:81628/149‑1 (MQ=255) gCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCACCCTGTGGGAGCGGGCACGCCCGCT‑CCCACAtggggcgcg < 2:25298/149‑7 (MQ=39) ccACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGc < 4:70533/149‑1 (MQ=255) aCTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCa‑a < 7:32568/149‑1 (MQ=255) ctgGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAgg < 1:238667/135‑1 (MQ=255) ctgGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAgg > 2:238667/1‑135 (MQ=255) gcgcTGGGAATGCTGTGGCCTCGCCTCAAAGAGCTGACTTGAAACTCCCCATCCTTGTGGCAGCAACTGTCTTGCCTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCaa < 4:189012/149‑1 (MQ=255) gcgcTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCaa < 1:264386/149‑1 (MQ=255) gcgcTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCaa < 1:268605/149‑1 (MQ=255) ggATTGCTGTGGATTCGCTTCAAAGAGCTGACTTGAAAGTCCCCATCTTTGTGGCAGCAAGTGTCTTGCTTAAAATCTAAAAGCTGAGGGGCCCCGTGTGGGTGCGGGCGGGCCCGCT‑CCAACAGGGTCGGTGCA‑AGTTTCAAGTCTg < 2:244649/148‑1 (MQ=255) ggAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTg < 4:208522/148‑1 (MQ=255) gAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGGCCCCTGTGGGAGCGGGCGTGCCCGCTCCCCACAGGGTCGGTGCA‑AGTTTCAAGTCTgg < 1:24782/149‑1 (MQ=255) cTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGaac > 6:25337/1‑148 (MQ=255) cTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGaa > 1:111885/1‑147 (MQ=255) cTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGaa < 2:111885/147‑1 (MQ=255) tgtgGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCACACCCGCT‑CCCACAggg < 5:170729/120‑1 (MQ=255) tgtgGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCACACCCGCT‑CCCACAggg > 6:170729/1‑120 (MQ=255) gCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAg < 6:138311/148‑1 (MQ=255) aTCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGcc < 2:46475/149‑1 (MQ=255) tCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGccc > 1:8232/1‑149 (MQ=255) cAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTTTGGGGAACAACAGGCCCTCCAGc < 4:213404/149‑1 (MQ=255) cTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATc > 7:201072/1‑149 (MQ=255) cTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCgtgt > 6:236065/1‑149 (MQ=255) ttGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCgtgt > 5:68544/1‑148 (MQ=255) ttGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCgtgt > 6:124710/1‑148 (MQ=255) aaGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTc > 1:21496/1‑149 (MQ=255) ccATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTc > 2:201367/1‑99 (MQ=255) ccATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTc < 1:201367/99‑1 (MQ=255) ccATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTc > 4:19689/1‑147 (MQ=255) cTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAgg < 5:124710/149‑1 (MQ=255) cTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAg < 5:236065/148‑1 (MQ=255) gcagcaACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTcc < 6:68544/149‑1 (MQ=255) aCTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTcc < 7:103842/131‑1 (MQ=255) aCTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTcc > 8:103842/1‑131 (MQ=255) cTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAgg < 6:92182/136‑1 (MQ=255) cTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAgg > 5:92182/1‑136 (MQ=255) tCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGtt < 6:40076/76‑1 (MQ=255) tCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGtt > 5:40076/1‑76 (MQ=255) ttGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATcc > 6:223371/1‑149 (MQ=255) cTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGTGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCggg > 7:238507/1‑149 (MQ=255) ttAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCgt > 1:104543/1‑109 (MQ=255) ttAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCgt < 2:104543/109‑1 (MQ=255) ttAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGc > 4:122717/1‑149 (MQ=255) aaaTCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTg < 8:201072/149‑1 (MQ=255) aaTCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGc > 7:235532/1‑149 (MQ=255) tCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATc > 4:28497/1‑101 (MQ=255) tCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATc < 3:28497/101‑1 (MQ=255) tAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTcc > 5:126609/1‑148 (MQ=255) aaaaGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTcc > 6:184729/1‑147 (MQ=255) aaaGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCa < 3:53201/148‑1 (MQ=255) aaaGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCa < 2:21496/148‑1 (MQ=255) aCGCGCCCCCTGTGGGAGTGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGc < 8:238507/148‑1 (MQ=255) gacccTGTGGGAGCGGGCACGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTcc < 7:104035/132‑1 (MQ=255) gacccTGTGGGAGCGGGCACGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTcc > 8:104035/3‑134 (MQ=255) tgtgGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTcc < 2:160210/129‑1 (MQ=255) tgtgGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTcc > 1:160210/1‑129 (MQ=255) gggAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCAGAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCgcgc > 1:179731/1‑148 (MQ=255) ggAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCaa < 3:19689/148‑1 (MQ=255) ggAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCAAc < 5:25337/149‑1 (MQ=255) gAGCGGGCACGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCAACt > 2:161230/1‑149 (MQ=255) gCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCAACTCg > 5:221250/1‑149 (MQ=255) | GCGGCAAGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCGCT‑CCCACAGGGTCGGTGCA‑AGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCAACTCG > NC_002947/6023015‑6023301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |