| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 739,200 | T→C | 7.9% | P72P (CCA→CCG) ‡ | pilD ← | leader peptidase/N‑methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 739,200 | 0 | T | C | 7.9% | 214.6 / 6.8 | 76 | P72P (CCA→CCG) ‡ | pilD | leader peptidase/N‑methyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (37/33); new base C (3/3); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.66e-01 | |||||||||||
CCACTACCAGCGACAGCAGCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCAGCACGTTGATAAAGCTGCCCACCAGCA > NC_002947/739052‑739348 | ccACTACCAGCGACAGCAGCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAgtgt < 5:227366/149‑1 (MQ=255) tACCAGCGACAGCAGCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTggg > 4:154092/1‑148 (MQ=255) ccAGCGACAGCAGCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCAc > 4:228228/1‑149 (MQ=255) ccAGCGACAGCAGCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCAc > 5:4966/1‑149 (MQ=255) ccAGCGACAGCAGCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCCCACACTGCGCGCAc > 1:244338/1‑149 (MQ=255) aGCGACAGCAGCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCg > 3:157558/1‑149 (MQ=255) gCGACAGCAGCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCgg > 8:202727/1‑149 (MQ=255) gCGACAGCAGCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCgg > 5:151611/1‑149 (MQ=255) aCAGCAGCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAg < 5:235891/149‑1 (MQ=255) cagcagCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAgg > 3:225512/1‑149 (MQ=255) cagcagCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCCCACACTGCGCGCACCggattc < 2:244338/149‑5 (MQ=255) agcGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCggg > 3:244559/1‑149 (MQ=255) cgcgcTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGggca < 3:228228/149‑1 (MQ=255) cgcTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGggcagg < 6:252427/149‑1 (MQ=255) gCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGcac < 7:202727/147‑1 (MQ=255) gCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAg > 4:194123/1‑149 (MQ=255) gCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAg < 6:4966/149‑1 (MQ=255) aCTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAgg < 5:203347/133‑1 (MQ=255) aCTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAgg > 6:203347/1‑133 (MQ=255) ccACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCCCACACTGCGCGCACCgg < 5:29491/125‑1 (MQ=255) ccACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCCCACACTGCGCGCACCgg > 6:29491/1‑125 (MQ=255) cACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAAc > 7:48307/1‑149 (MQ=255) ccGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAg < 4:31433/136‑1 (MQ=255) ccGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAg > 3:31433/1‑136 (MQ=255) cGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGt < 8:221575/149‑1 (MQ=255) aCGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGtgctgc < 3:154092/148‑1 (MQ=255) aGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGt > 5:175763/1‑149 (MQ=255) ggCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTc < 8:48307/149‑1 (MQ=255) ggCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTc < 3:244832/149‑1 (MQ=255) gCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGggca < 4:26331/116‑1 (MQ=255) gCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGggca > 3:23011/1‑116 (MQ=255) gCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGggca < 4:23011/116‑1 (MQ=255) gCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGggca > 3:26331/1‑116 (MQ=255) cGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGcc < 3:194123/148‑1 (MQ=255) gTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCg < 3:19237/140‑1 (MQ=255) gTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCg > 4:19237/1‑140 (MQ=255) gTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGcccc > 3:61815/1‑148 (MQ=255) gACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTg > 5:58180/1‑149 (MQ=255) aCAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAGTACCTCTTGCGCCt > 3:135483/1‑149 (MQ=255) cAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTc < 4:244559/149‑1 (MQ=255) aGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCa > 3:230229/1‑149 (MQ=255) cgcccgccCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACg > 6:196960/1‑149 (MQ=255) gcccAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGcc < 3:172958/149‑1 (MQ=255) aGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACTAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGc < 7:145827/149‑1 (MQ=255) ggCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGtgc < 1:207475/100‑1 (MQ=255) ggCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGtgc > 2:207475/1‑100 (MQ=255) ggCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGcc < 5:196960/149‑1 (MQ=255) gTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGtg > 5:195882/1‑93 (MQ=255) gTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGtg < 6:195882/93‑1 (MQ=255) aGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCa < 8:128189/105‑1 (MQ=255) aGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCa > 7:128189/1‑105 (MQ=255) gCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCa < 4:157558/149‑1 (MQ=255) cTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCAt > 6:256222/1‑149 (MQ=255) tgatgaCCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCaa < 4:27668/109‑1 (MQ=255) tgatgaCCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCaa > 3:27668/1‑109 (MQ=255) tgatgaCCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCAt > 1:90537/1‑148 (MQ=255) aCCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCgg < 6:151611/149‑1 (MQ=255) cGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCgg > 5:148159/1‑147 (MQ=255) ttCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGAt < 6:148159/148‑1 (MQ=255) ttCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATa > 3:234261/1‑149 (MQ=255) agcatccACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATa < 8:7601/144‑1 (MQ=255) tcCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGa > 6:86701/1‑144 (MQ=255) tcCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGa < 5:86701/144‑1 (MQ=255) ccACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACctct < 4:202212/97‑1 (MQ=255) ccACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACctct > 3:202212/1‑97 (MQ=255) ccACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATacac > 6:208771/1‑147 (MQ=255) ccACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATacac > 8:107203/1‑147 (MQ=255) ccACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCa > 8:103719/1‑149 (MQ=255) ccACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCa < 4:234261/149‑1 (MQ=255) acgcacgAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCAGc < 6:58180/149‑1 (MQ=255) gAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCAGCACGtt > 6:104012/1‑148 (MQ=255) gAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCAGCACGtt > 5:88657/1‑148 (MQ=255) aTCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCAGCACGTTGa > 1:140222/1‑148 (MQ=255) cccGGTGCCCACACTGCGCGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCAGCACGTTg < 7:239416/145‑1 (MQ=255) cccGGTGCCCACACTGCGCGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCAGCACGTTg > 8:239416/2‑146 (MQ=255) gcgcgcAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCAGCACGTTGATAAAGCTg < 7:103719/149‑1 (MQ=255) gcgcgcAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCAGCACGTTGATAAAGCTg < 7:107203/149‑1 (MQ=255) tgGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCAGCACGTTGATAAAGCTGCCCACcagca < 4:225512/149‑1 (MQ=255) | CCACTACCAGCGACAGCAGCGCGCTGGCCACTTCCACTACCGGGTAACGCAGGCTGATGCGGTTTTTGCAGGACGAACAGCGCCCGCCCAAGGCCAGGTAGCTGATGACCGGAATGTTCTCCCACGCACGAATCCGGTGCGCGCAGTGTGGGCACCGGGAGGCGGGCAGGCACAGGTCGAAACGCGCGTGCTGCGTGGTCGGCAGCCCCAATACCTCTTGCGCCTCACGCTGCCATTGCCGCTCCAGCATGATCGGCAGGCGATACACCAGCACGTTGATAAAGCTGCCCACCAGCA > NC_002947/739052‑739348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |