Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 767,938 A→G 8.5% T6A (ACC→GCC)  mmuP → S‑methyl‑L‑methionine transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947767,9380AG 8.5% 127.3 / 2.6 47T6A (ACC→GCC) mmuPS‑methyl‑L‑methionine transporter
Reads supporting (aligned to +/- strand):  ref base A (21/22);  new base G (2/2);  total (23/24)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

CACCCACCCGTGTGGTGGGTGCCACTTCATGAAGTCGAACAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGCGCGG  >  NC_002947/767794‑768085
                                                                                                                                                |                                                                                                                                                   
cacccaccCGTGTGGTGGGTGCCACTTCATGAAGTCGAACAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACcac                                                                                                                                                 <  3:70139/149‑1 (MQ=255)
         gtgtGGTGGGTGCCACTTCATGAAGTCGAACAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGaaa                                                                                                                                        <  1:207110/149‑1 (MQ=255)
          tgtgGTGGGTGCCACTTCATGAAGTCGAACAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAAt                                                                                                                                       <  4:229090/149‑1 (MQ=255)
          tgtgGTGGGTGCCACTTCATGAAGTCGAACAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAAt                                                                                                                                       <  2:258026/149‑1 (MQ=255)
                       aCTTCATGAAGTCGAACAAAAACAATATGCTAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCAt                                                                                                                           >  1:21438/1‑148 (MQ=255)
                         ttCATGAAGTCGAACAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATAcc                                                                                                                        >  7:64572/1‑149 (MQ=255)
                             tGAAGTCGAACAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCtt                                                                                                                      >  4:249497/1‑147 (MQ=255)
                             tGAAGTCGAACAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTc                                                                                                                     >  5:14321/1‑148 (MQ=255)
                                     aaCAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGat                                                                                                            <  5:232168/149‑1 (MQ=255)
                                      aCAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACcac                                                                                                                                                 <  2:120344/111‑1 (MQ=255)
                                      aCAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACcac                                                                                                                                                 >  1:120344/1‑111 (MQ=255)
                                        aaaaaCAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGatat                                                                                                          >  1:64797/1‑148 (MQ=255)
                                         aaaaCAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATg                                                                                                         >  4:201671/1‑148 (MQ=255)
                                            aCAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGTGCATACCTTCAAGCAGGATATGCaaa                                                                                                     <  1:143857/149‑1 (MQ=255)
                                                  tGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAGGCAGGATATGCAAACCCGc                                                                                                <  3:249497/148‑1 (MQ=255)
                                                     aaGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCcaca                                                                                            >  1:28115/1‑149 (MQ=255)
                                                      aGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGc                                                                                                        <  7:11868/136‑1 (MQ=255)
                                                      aGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGc                                                                                                        >  8:11868/1‑136 (MQ=255)
                                                           aCTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAGCCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCg                                                                                                 <  3:91714/138‑1 (MQ=255)
                                                           aCTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAGCCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCg                                                                                                 >  4:91714/1‑138 (MQ=255)
                                                           aCTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAGCCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCg                                                                                                 >  4:87870/1‑138 (MQ=255)
                                                           aCTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAGCCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCg                                                                                                 <  3:87870/138‑1 (MQ=255)
                                                                    gCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGgcgc                                                                             >  5:143278/1‑149 (MQ=255)
                                                                     ctctGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCt                                                                            >  1:98679/1‑149 (MQ=255)
                                                                          ccAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTgg                                                                          <  3:201671/146‑1 (MQ=255)
                                                                          ccAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTgg                                                                          <  2:98679/146‑1 (MQ=255)
                                                                                caaGGACGTAGCAACGACCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGa                                                                 >  8:79117/3‑149 (MQ=255)
                                                                                cGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGa                                                                 >  1:50511/1‑149 (MQ=255)
                                                                                  aGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATa                                                               <  8:64572/149‑1 (MQ=255)
                                                                                  aGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATa                                                               <  6:14321/149‑1 (MQ=255)
                                                                                           cTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGc                                                      <  6:143278/149‑1 (MQ=255)
                                                                                            tACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCa                                                                                      >  3:94851/1‑116 (MQ=255)
                                                                                            tACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGcc                                                     >  3:151895/1‑149 (MQ=255)
                                                                                               gTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGt                                                  <  2:21438/149‑1 (MQ=255)
                                                                                                 ccTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGttt                                                <  2:64797/149‑1 (MQ=255)
                                                                                                  cTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTTGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGttt                                                <  1:231391/148‑1 (MQ=255)
                                                                                                        cGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCGAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGt                                         >  1:88738/1‑149 (MQ=255)
                                                                                                        cGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGt                                         >  1:259380/1‑149 (MQ=255)
                                                                                                         gCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCTCAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTc                                        <  3:220829/149‑1 (MQ=255)
                                                                                                             aCTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGc                                    <  7:79117/149‑1 (MQ=255)
                                                                                                                 tCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTaca                                >  3:265321/1‑149 (MQ=255)
                                                                                                                          aCCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAAc                        <  4:265321/148‑1 (MQ=255)
                                                                                                                            ccACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAg                     >  6:50503/1‑149 (MQ=255)
                                                                                                                                     ccGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTCTTTCTCACGTCGGTCTACACCGTTAACCAgcccggcccg            >  8:237579/1‑149 (MQ=255)
                                                                                                                                             aCAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAAcc                                                                                                   >  6:188478/1‑54 (MQ=255)
                                                                                                                                             aCAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAAcc                                                                                                   <  5:188478/54‑1 (MQ=255)
                                                                                                                                              cAACCACAACTAGAAATGCCTCGGCGCATACCTTCGAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGcgcg   <  2:88738/149‑1 (MQ=255)
                                                                                                                                               aaCCACAACTAGAACTGCCTCGGCGCATACCTACAAGCAGTATATGCAAACGCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGCGCgg  <  8:237616/149‑1 (MQ=255)
                                                                                                                                               aaCCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGCGCgg  >  8:51933/1‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                   
CACCCACCCGTGTGGTGGGTGCCACTTCATGAAGTCGAACAAAAACAATATGCAAGGCAACTCGATTCGCTCTGCCAAGACGAGGTCGTTGCTACGTCCTTGCCCGCCAACTTTCATGAGTAACCCACAATGTCCGTGCAGACAACCACAACTAGAAATGCCTCGGCGCATACCTTCAAGCAGGATATGCAAACCCGCCACATCGTCATGCTGGCGCTGGGCGGAGTGATAGGCACCGGCCTGTTTCTCACGTCGGGCTACACCGTTAACCAGGCCGGCCCGTTGGGCGCGG  >  NC_002947/767794‑768085

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑