Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,797,345 C→T 7.8% L16L (CTG→TTG)  lpxA → acyl‑[acyl‑carrier‑protein]‑‑UDP‑N‑ acetylglucosamine O‑acyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,797,3450CT 7.8% 180.7 / 4.5 64L16L (CTG→TTG) lpxAacyl‑[acyl‑carrier‑protein]‑‑UDP‑N‑ acetylglucosamine O‑acyltransferase
Reads supporting (aligned to +/- strand):  ref base C (35/24);  new base T (2/3);  total (37/27)
Fisher's exact test for biased strand distribution p-value = 6.42e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.07e-01

AGTTCCTCAGCCGTAAAAGCATGATCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCCTCGAT  >  NC_002947/1797197‑1797490
                                                                                                                                                    |                                                                                                                                                 
aGTTCCTCAGCCGTAAAAGCATGATCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGACGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGc                                                                                                                                                   >  7:77370/1‑149 (MQ=255)
  ttCCTCAGCCGTAAAAGCATGATCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTg                                                                                                                                                 <  5:91743/149‑1 (MQ=255)
    ccTCAGCCGTAAAAGCATGATCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGc                                                                                                                                               >  2:81035/1‑149 (MQ=255)
      tCAGCCGTAAAAGCATGATCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAGCTTGGCCg                                                                                                                                             >  6:264265/1‑149 (MQ=255)
        aGCCGTAAAAGCATGATCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAGCTTGGCCGAc                                                                                                                                           <  5:264265/149‑1 (MQ=255)
         gCCGTAAAAGCATGATCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAGCTTGGCCGACg                                                                                                                                          <  5:80318/149‑1 (MQ=255)
              aaaaGCATTATCTGGAAGTTAGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTg                                                                                                                                                 <  2:160652/137‑1 (MQ=255)
                 aGCATGATCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCAATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAg                                                                                                                                  <  1:81035/149‑1 (MQ=255)
                    aTGATCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGACGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTc                                                                                                                               <  8:77370/149‑1 (MQ=255)
                        tCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAg                                                                                                                                  <  5:162758/142‑1 (MQ=255)
                        tCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAg                                                                                                                                  >  6:162758/1‑142 (MQ=255)
                             aaGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTgg                                                                                                                      <  5:245596/149‑1 (MQ=255)
                                    aGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGCACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCg                                                                                                               >  3:64329/1‑149 (MQ=255)
                                     gTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGCCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCCACGTCGGCCATTGGTCGATCGt                                                                                                              >  4:191838/1‑149 (MQ=255)
                                        ccGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCg                                                                                                                                    >  7:163333/1‑124 (MQ=255)
                                        ccGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCg                                                                                                                                    <  8:163333/124‑1 (MQ=255)
                                        ccGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTgg                                                                                                           >  6:82029/1‑149 (MQ=255)
                                            gcCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCt                                                                                                       <  3:191838/149‑1 (MQ=255)
                                               cTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTCTGAATTCGATTGATCCTCGGGCCATTATCTATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGAt                                                                                                    <  6:199170/149‑1 (MQ=255)
                                                ttGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATg                                                                                                   >  5:115669/1‑149 (MQ=255)
                                                          cAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCgg                                                                                         <  6:191157/149‑1 (MQ=255)
                                                                    tGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCAcc                                                                               >  6:114444/1‑149 (MQ=255)
                                                                     gCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTa                                                                                                 >  5:87065/1‑130 (MQ=255)
                                                                     gCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTa                                                                                                 <  6:87065/130‑1 (MQ=255)
                                                                       tCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGt                                                                             >  1:14960/1‑148 (MQ=255)
                                                                         ggCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTAt                                                                          <  3:42855/149‑1 (MQ=255)
                                                                             taaaTCACCTGCGCGGAACGCTCCCTTTTAATTCGTTTGATCCTCGGGCCATTTTCGATCCGTGGGCCAAGCTGGCCGACGGCGTCGATGTGGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGc                                                                      <  4:64329/148‑1 (MQ=255)
                                                                                 tCACCTGCGCGGAACGCTCCCTATGAATTCGAATGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCAGACGGCGTCGAGGTAGGCCCTTGGTCGATAGTTTGCACTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCACg                                                                   >  5:124647/1‑148 (MQ=255)
                                                                                    ccTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAATCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCAtg                                                               >  8:208291/1‑149 (MQ=255)
                                                                                        cgcgGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCAtgttgt                                                           <  5:82029/149‑1 (MQ=255)
                                                                                        cgcgGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCAtgtt                                                             <  2:14960/147‑1 (MQ=255)
                                                                                             aaCGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGAAGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTc                                                       >  3:31187/1‑148 (MQ=255)
                                                                                               cGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAggg                                                                                   <  3:118113/118‑1 (MQ=255)
                                                                                               cGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAggg                                                                                   >  4:118113/1‑118 (MQ=255)
                                                                                               cGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCa                                                      >  5:169395/1‑147 (MQ=255)
                                                                                                  tCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGc                                                 >  7:10082/1‑149 (MQ=255)
                                                                                                    ccTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGccc                                               >  8:160405/1‑149 (MQ=255)
                                                                                                     cTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGccc                                               >  5:77414/1‑148 (MQ=255)
                                                                                                      tATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGa                                             >  7:170920/1‑149 (MQ=255)
                                                                                                              cGATTTATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCTGGTAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCAt                                      <  1:176974/148‑1 (MQ=255)
                                                                                                              cGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATc                                     >  6:98083/1‑149 (MQ=255)
                                                                                                                aTTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCATACGGCGTCGAGGTCGGCCCTTTGGCGATCGTTGGCCCTGATGTAGAAATCGGGGATGGCACCGTGATCGGCCCGCATGTTGTACTCAAAGGCCCCACCCGCATCg                                    >  6:31549/1‑148 (MQ=255)
                                                                                                                    aTCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCaa                                <  6:73667/148‑1 (MQ=255)
                                                                                                                     tCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGc                                                                  >  4:104399/1‑113 (MQ=255)
                                                                                                                     tCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGc                                                                  <  3:104399/113‑1 (MQ=255)
                                                                                                                       cTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGcac                            <  6:77414/149‑1 (MQ=255)
                                                                                                                        tCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGcac                            >  1:142329/1‑148 (MQ=255)
                                                                                                                            gCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAg                                                                                     <  7:100115/87‑1 (MQ=255)
                                                                                                                            gCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAg                                                                                     >  8:100115/1‑87 (MQ=255)
                                                                                                                            gCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCg                       >  6:73133/1‑149 (MQ=255)
                                                                                                                                ttttCGATCCGTGGGCCATGCTGGCCTACGGCGTAGAGGTCGGCCCTTGGTCGTTCGTTGGCCCTGATGTAGAAATCGGGGAGGGCAcc                                                                               <  5:220234/86‑1 (MQ=255)
                                                                                                                                ttATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCATGGTCGATCGTTGGCACTGAAGTAGAAATAGGGGAGGGCAcc                                                                               >  6:220234/1‑89 (MQ=255)
                                                                                                                                     gATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCa              <  5:98083/149‑1 (MQ=255)
                                                                                                                                     gATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGCTCGAACGTTGGCCCTGATGTAGAAATCGATGAGGGCAACGTTATCGGCCCGCATCTTGTTCTCAAACGCCCGACCCGCATCGACAAGCACAACCCTAACttt                >  2:45083/1‑147 (MQ=255)
                                                                                                                                      aTCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCACAtgtt                                                             >  4:262033/1‑101 (MQ=255)
                                                                                                                                         cGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGttt          >  5:214758/1‑149 (MQ=255)
                                                                                                                                          gTCGGCCAGCTTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCg                                    >  8:200816/1‑122 (MQ=255)
                                                                                                                                          gTCGGCCAGCTTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCg                                    <  7:200816/122‑1 (MQ=255)
                                                                                                                                           tCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGc                                                 >  3:170560/1‑108 (MQ=255)
                                                                                                                                           tCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGc                                                 <  4:170560/108‑1 (MQ=255)
                                                                                                                                           tCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGtttt         >  3:211260/1‑148 (MQ=255)
                                                                                                                                           tCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTc        >  6:180365/1‑149 (MQ=255)
                                                                                                                                              gCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCCTc     >  2:3275/1‑149 (MQ=255)
                                                                                                                                                cAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCCTCGa   >  7:10600/1‑149 (MQ=255)
                                                                                                                                                 aaGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCACTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTTCTAAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCCTCGAt  >  4:159979/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
AGTTCCTCAGCCGTAAAAGCATGATCTGGAAGTTCGAGTGCCGCGCCCTTGTCGATGGCAAGCCGGTCTGCTCGGCAGAAATCACCTGCGCGGAACGCTCCCTATGAATTCGATTGATCCTCGGGCCATTATCGATCCGTCGGCCAAGCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCCTCGAT  >  NC_002947/1797197‑1797490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: