Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,989,571 G→C 6.1% G274A (GGT→GCT) ‡ PP_1780 → mannosyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,989,5710GC 6.1% 213.0 / 4.3 66G274A (GGT→GCT) ‡PP_1780mannosyltransferase
Reads supporting (aligned to +/- strand):  ref base G (30/32);  new base C (2/2);  total (32/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.22e-01

CAGCGCCTTCGATGCTGAGTATGGGGTGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGATACCCAGCAACGGCTGGCTCTTGCTGATGAGCGTATGGC  >  NC_002947/1989428‑1989718
                                                                                                                                               |                                                                                                                                                   
cAGCGCCTTCGATGCTGAGTATGGGGTGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGc                                                                                                                                                <  5:277423/149‑1 (MQ=255)
      cTTCGATGCTGAGTATGGGGTGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAgg                                                                                                                                          <  6:30084/149‑1 (MQ=255)
       ttCGATGCTGAGTATGGGGTGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAgg                                                                                                                                          >  4:121803/1‑148 (MQ=255)
           aTGCTGAGTATGGGGTGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGcc                                                                                                                                     >  7:133421/1‑149 (MQ=255)
              cTGAGTATGGGGTGACCCTTGAGGACCTGGCGGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGTGCTGACCCAGCTCCAggttaactt                                                                                                                                   <  3:194160/148‑8 (MQ=255)
                gAGTATGGGGTGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTtgt                                                                                                                                >  8:214716/1‑149 (MQ=255)
                  gTATGGGGTGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTtgtg                                                                                                                               >  6:268260/1‑148 (MQ=255)
                   tATGGGGTGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTgg                                                                                                                              <  2:135512/148‑1 (MQ=255)
                     tGGGGTGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGAtt                                                                                                                           >  3:217114/1‑149 (MQ=255)
                       gggTGACCCTTGAGGACCTGGCTGAGCGCTATAAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGGCAGCACCAGGCAGCCCTTGTGGAttt                                                                                                                          <  4:66911/148‑1 (MQ=255)
                        ggTGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGAttt                                                                                                                          >  4:137788/1‑147 (MQ=255)
                          tGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGc                                                                                                                      <  8:99797/149‑1 (MQ=255)
                             cccTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAg                                                                                                                   >  2:209644/1‑149 (MQ=255)
                              ccTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCACAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAgg                                                                                                                  <  1:209644/149‑1 (MQ=255)
                              acTTGAGGACCTGGATCAGCGCTATGAAGAAACGCTGGCTAGCAACTTCCAGCAAGTGCGCGAAAGCGTCGATAGATGCCATACTGCATTGACGCAAGATAACCAGGACATGCGACAGCAACACGCAGACCTTGTGGATGAGAGCCAg                                                                                                                   >  8:222240/2‑148 (MQ=255)
                                  gAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGt                                                                                                              >  4:12300/1‑149 (MQ=255)
                                   aGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTc                                                                                                             <  3:154095/149‑1 (MQ=255)
                                     gACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGa                                                                                                           <  8:133421/149‑1 (MQ=255)
                                      aCCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAg                                                                                                          <  5:202986/149‑1 (MQ=255)
                                       ccTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGc                                                                                                         <  3:12300/149‑1 (MQ=255)
                                          ggCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCAAGCAAGTGGGCGAAAGCGTCGAAATCTGCAATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGAACCAGGCAGCACTTGTGGATTTGAGCCAGTAAGTAGAGCGt                                                                                                       >  3:210945/1‑148 (MQ=255)
                                           gCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGt                                                                                                       <  8:214663/147‑1 (MQ=255)
                                           gCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCa                                                                                                     >  3:93613/1‑149 (MQ=255)
                                             tGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATc                                                                                                   <  1:167145/149‑1 (MQ=255)
                                                   cTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCg                                                                                             <  7:214716/149‑1 (MQ=255)
                                                   cTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATGCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTTTGGATTTGAGCCAAGAAGTCGAGCGAAATAGCGcc                                                                                              >  8:190125/1‑148 (MQ=255)
                                                    tATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCCTTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCg                                                                                             >  6:268353/1‑148 (MQ=255)
                                                    tATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCg                                                                                             >  5:201043/1‑148 (MQ=255)
                                                      tGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAAc                                                                                          >  3:20847/1‑149 (MQ=255)
                                                         agaaAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTgg                                                                                       <  4:217114/149‑1 (MQ=255)
                                                          gaaAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTg                                                                                        >  5:273955/1‑147 (MQ=255)
                                                            aaGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGgaga                                                                                    <  7:181833/149‑1 (MQ=255)
                                                              ggctggctAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGc                                                                                  <  3:121803/149‑1 (MQ=255)
                                                                 tggctAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCt                                                                                >  6:21842/1‑148 (MQ=255)
                                                                  ggctAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTc                                                                               >  3:196710/1‑148 (MQ=255)
                                                                     taccAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGa                                                                                                                        >  7:225838/4‑104 (MQ=255)
                                                                     tAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCGTTGTGGATTTGa                                                                                                                        <  8:225838/104‑1 (MQ=255)
                                                                     tAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTcaa                                                                             >  5:265155/1‑147 (MQ=255)
                                                                     tAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTcaa                                                                             <  6:265155/147‑1 (MQ=255)
                                                                      aGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTcaagc                                                                           <  4:210945/148‑1 (MQ=255)
                                                                         aaCTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAgt                                                                       >  8:32185/1‑149 (MQ=255)
                                                                          aCTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAgtg                                                                      <  6:273955/149‑1 (MQ=255)
                                                                                aGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAAc                                                                >  8:136663/1‑149 (MQ=255)
                                                                                aGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGCCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAAc                                                                >  2:161547/1‑149 (MQ=255)
                                                                                    aGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGcc                                                            <  5:258129/149‑1 (MQ=255)
                                                                                         gCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAAGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAac                                                       <  7:190125/149‑1 (MQ=255)
                                                                                          cGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCGAGTGGTGAACGGCCTGAac                                                       >  5:139385/1‑148 (MQ=255)
                                                                                          cGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAacc                                                      <  4:93613/149‑1 (MQ=255)
                                                                                             aaGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGGGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAaccacc                                                   <  5:268260/149‑1 (MQ=255)
                                                                                                    gAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGt                                             <  4:196710/148‑1 (MQ=255)
                                                                                                    gAAAGCTGCAATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGt                                             <  7:136663/148‑1 (MQ=255)
                                                                                                            ccATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGa                                         <  3:247204/144‑1 (MQ=255)
                                                                                                            ccATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGa                                         >  4:247204/1‑144 (MQ=255)
                                                                                                            ccATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGATAcc                                     >  3:187303/1‑148 (MQ=255)
                                                                                                                    cATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGcc                                                            <  8:252213/117‑1 (MQ=255)
                                                                                                                         tCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCATGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCTTCTGTCCGATACCCAGCAACggctgg                        <  5:153834/148‑1 (MQ=255)
                                                                                                                                   aCCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGATACCCAGCAACGGCTGGCTCTTGCtgat             >  4:169250/1‑149 (MQ=255)
                                                                                                                                   aCCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGATACCCAGCAACGGCTGGCTCTTGCtgat             <  4:187303/149‑1 (MQ=255)
                                                                                                                                    ccTGGTGCTGACCCAGCTCCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGATACCCAGCAAc                              <  3:226/131‑1 (MQ=255)
                                                                                                                                    ccTGGTGCTGACCCAGCTCCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGATACCCAGCAAc                              >  4:226/1‑131 (MQ=255)
                                                                                                                                    ccTGGTGCTGACCCAGCTCCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGATACCCAGCAACGGCTGGCTCTTGCtgat             >  5:140172/1‑148 (MQ=255)
                                                                                                                                    ccTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGACTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGATACCCAGCAACGGCTGGCTCTTGCtgat             >  6:39787/1‑148 (MQ=255)
                                                                                                                                        gAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGATACCCAGCAACGGCTGGCTCTTGCTGATGAGc         <  5:21842/148‑1 (MQ=255)
                                                                                                                                          gCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAac                                                       <  4:86880/100‑1 (MQ=255)
                                                                                                                                          gCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAac                                                       >  3:86880/1‑100 (MQ=255)
                                                                                                                                            tGGGTCAGCACCAGGCAGCCATTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTCGAGAGCCTCAAGCAAGTGGTGAACGACCTGAACCACCATCTGTCCGATACCCAGCAACGGCTGGCTCTTGATGATGAGCGTATg    >  7:122627/1‑149 (MQ=255)
                                                                                                                                              ggTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGATACCCAGCAACGGCTGGCTCTTGCTGATGAGCGTATggc  >  2:76247/1‑149 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
CAGCGCCTTCGATGCTGAGTATGGGGTGACCCTTGAGGACCTGGCTGAGCGCTATGAAGAAAGGCTGGCTAGCAACTTCCAGCAAGTGGGCGAAAGCGTCGAAAGCTGCCATTCGGCATTGTCGCAAGTTAACCTGGAGCTGGGTCAGCACCAGGCAGCCCTTGTGGATTTGAGCCAGGAAGTCGAGCGTCATCGCGCCGAACTGGAGAGCCTCAAGCAAGTGGTGAACGGCCTGAACCACCATCTGTCCGATACCCAGCAACGGCTGGCTCTTGCTGATGAGCGTATGGC  >  NC_002947/1989428‑1989718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: