| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 343,510 | G→T | 7.9% | intergenic (‑66/‑174) | PP_5439 ← / → PP_5440 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 343,510 | 0 | G | T | 7.9% | 197.9 / 6.8 | 63 | intergenic (‑66/‑174) | PP_5439/PP_5440 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (32/26); new base T (2/3); total (34/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.75e-01 | |||||||||||
GGCCGCTGCGTACCATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGC > NC_002947/343363‑343656 | ggCCGCTGCGTACCATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAgcg < 4:264412/148‑1 (MQ=255) cGCTGCGTACCATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGgc‑gc > 6:263225/1‑149 (MQ=255) tACCATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGATTAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTgg < 1:67088/149‑1 (MQ=255) tCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCTGCAGCGCCCAGgcgcgc < 4:212209/144‑3 (MQ=255) tCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCTGCAGCGCCCAGgcgcgc > 3:212209/1‑142 (MQ=255) gCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCTGCAGCGCCCAGgcgcgccgc < 4:213298/144‑6 (MQ=255) gCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCTGCAGCGCCCAGgcgcgccgc > 3:213298/1‑139 (MQ=255) cTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCTGCAGCGCCCTGGCGC‑GCCGCTTgg < 6:70912/147‑2 (MQ=255) cTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCtt > 1:111933/1‑145 (MQ=255) cTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTga < 5:157707/147‑1 (MQ=255) ccTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCt > 8:184494/1‑149 (MQ=255) gCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCtgtg < 2:163819/148‑1 (MQ=255) gcggcgCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGa < 5:263225/147‑1 (MQ=255) gcgcgcTTGGCGCGTTTCTGTTGCTTTGTAGGGGTGGCCATGGGGAAATCCTTGGGGGATTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACat < 6:43204/149‑1 (MQ=255) cgcTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATc < 7:135331/149‑1 (MQ=255) ttGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATc > 1:88387/1‑146 (MQ=255) gTTTCTGTTGCTTGTTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGGAGCATGAGATGTCTGTGCGATACATATCCTGATTATTc > 8:126167/1‑149 (MQ=255) gTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAg > 4:260029/1‑142 (MQ=255) gTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAg < 3:260029/142‑1 (MQ=255) gTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTc < 5:60225/149‑1 (MQ=255) ttCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCg > 3:96145/1‑148 (MQ=255) cTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGAc > 5:101234/1‑149 (MQ=255) ttGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGAcc > 5:118136/1‑147 (MQ=255) gCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTc < 3:250835/140‑1 (MQ=255) gCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTc > 4:250835/1‑140 (MQ=255) gCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTg < 4:96145/148‑1 (MQ=255) cTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGAc > 6:268833/1‑143 (MQ=255) cTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGAc < 5:268833/143‑1 (MQ=255) ttGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGc > 5:266782/1‑149 (MQ=255) gTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCt < 6:101234/149‑1 (MQ=255) aGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGc > 1:141387/1‑149 (MQ=255) tGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGc > 4:16218/1‑149 (MQ=255) cATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTtct > 2:136474/1‑149 (MQ=255) tGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTtctct > 7:192712/1‑149 (MQ=255) ggAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCAGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCct < 1:125439/149‑1 (MQ=255) gAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCctg > 6:79175/1‑149 (MQ=255) aaaTCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCctgc < 2:88387/149‑1 (MQ=255) tCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCtgctgc > 1:10673/1‑149 (MQ=255) tCCTTGCGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAATCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGTCCCTGCGTAGCTTCTCTCCtgctgc < 7:126167/149‑1 (MQ=255) ccTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCtgctgc > 5:52533/1‑148 (MQ=255) ttGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTgccag > 3:125239/1‑149 (MQ=255) aGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCATGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGtt < 6:266782/149‑1 (MQ=255) gTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTTGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtg > 3:163612/1‑149 (MQ=255) tCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGa > 1:261921/1‑105 (MQ=255) tCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGa < 2:261921/105‑1 (MQ=255) tCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtgg > 2:147864/1‑149 (MQ=255) tCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTGGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtgg > 2:91741/1‑149 (MQ=255) tCTGA‑AAGTGCGCGGATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGAGGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtgg > 2:94816/1‑149 (MQ=255) cTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCAAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtgg < 7:184494/148‑1 (MQ=255) a‑aaGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggctg < 3:16218/148‑1 (MQ=255) a‑aaGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggctg < 6:52533/148‑1 (MQ=255) a‑aaGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggc < 6:118136/146‑1 (MQ=255) cgcgTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTTGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCt < 4:163612/149‑1 (MQ=255) gcgTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTg < 8:192712/149‑1 (MQ=255) tGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTg > 5:153647/1‑149 (MQ=255) gAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCa < 7:73129/145‑1 (MQ=255) gAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCa > 8:73129/1‑145 (MQ=255) aGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTgcgc < 1:136474/149‑1 (MQ=255) cGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTc > 8:209196/1‑149 (MQ=255) aaaCCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCAt > 1:50903/1‑108 (MQ=255) aaaCCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCAt < 2:50903/108‑1 (MQ=255) aCCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgag > 7:81184/1‑149 (MQ=255) ccAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagt > 6:245706/1‑148 (MQ=255) aaGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGAt > 4:37102/1‑149 (MQ=255) gcggc‑gCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATgc < 4:125239/149‑1 (MQ=255) | GGCCGCTGCGTACCATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGA‑AAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGC > NC_002947/343363‑343656 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |