Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,287,468 | C→G | 6.1% | G90R (GGC→CGC) | PP_3758 ← | two component system response regulator/sensor histidine kinase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,287,468 | 0 | C | G | 6.1% | 210.5 / 3.8 | 65 | G90R (GGC→CGC) | PP_3758 | two component system response regulator/sensor histidine kinase |
Reads supporting (aligned to +/- strand): ref base C (31/30); new base G (2/2); total (33/32) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01 |
GCCGGCCAAGCACCTTGCGCTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTCGTGCTCCAGCAGCAACGACAAGGCAGC > NC_002947/4287327‑4287615 | gCCGGCCAAGCACCTTGCGCTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCcgcg > 3:77267/1‑149 (MQ=255) gCCAAGCACCTTGCGCTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGa < 4:77267/149‑1 (MQ=255) cAAGCACCTTGCGCTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGAc > 4:101310/1‑148 (MQ=255) aaGCACCTTGCGCTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACg > 7:27224/1‑148 (MQ=255) aaGCACCTTGCGCTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACg > 4:179330/1‑148 (MQ=255) aGCACCTTGCGCTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGaa < 3:101310/149‑1 (MQ=255) gCACCTTGCGCTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAg < 3:179330/149‑1 (MQ=255) ccTTGCGCTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACg < 6:186927/149‑1 (MQ=255) gcgcTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCg > 8:60001/1‑149 (MQ=255) cgcTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCgg > 8:1175/1‑149 (MQ=255) gCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGAtgt < 4:130575/149‑1 (MQ=255) gCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGAt < 1:248346/147‑1 (MQ=255) ggAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCGGGCcgcgagatg < 7:241593/130‑6 (MQ=255) ggAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCGGGCcgcgagatg > 8:241593/1‑125 (MQ=255) ggAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATc < 7:99420/140‑1 (MQ=255) ggAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATc > 8:99420/1‑140 (MQ=255) ggAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATc > 8:95809/1‑140 (MQ=255) ggAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATc < 7:95809/140‑1 (MQ=255) gAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCt > 3:220019/1‑149 (MQ=255) gAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCt < 8:27224/149‑1 (MQ=255) gacgaACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGTCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGt > 3:204904/1‑149 (MQ=255) gacgaACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGt < 7:223721/149‑1 (MQ=255) gagaCCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCGggccgc > 5:20154/1‑104 (MQ=255) gagaCCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCGggccgc < 6:20154/104‑1 (MQ=255) ttACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGc < 5:151619/148‑1 (MQ=255) ttACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGc < 7:1175/148‑1 (MQ=255) tACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGc > 4:3072/1‑147 (MQ=255) tACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGc < 3:3072/147‑1 (MQ=255) aCCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAg > 3:250449/1‑149 (MQ=255) cAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGtt < 8:229657/146‑1 (MQ=255) cAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGtt > 7:229657/1‑146 (MQ=255) gtCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGt > 5:123002/1‑149 (MQ=255) gAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTc < 7:60001/148‑1 (MQ=255) gAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCa > 2:129457/1‑149 (MQ=255) gAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCa > 3:73210/1‑149 (MQ=255) gAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCa > 6:255257/1‑149 (MQ=255) ttGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTg < 1:81716/102‑1 (MQ=255) ttGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTg > 2:81716/1‑102 (MQ=255) ttGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCgg > 8:218864/1‑149 (MQ=255) ttGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCgg > 3:231755/1‑149 (MQ=255) gtgCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCa > 3:153594/1‑149 (MQ=255) tgCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCgg > 4:81664/1‑146 (MQ=255) tgCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCgg < 3:81664/146‑1 (MQ=255) tgCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCa < 5:255257/148‑1 (MQ=255) cAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATc < 5:136244/148‑1 (MQ=255) aGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTg > 2:43652/1‑149 (MQ=255) aaaGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGca < 4:204904/149‑1 (MQ=255) aGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGcaca > 6:252568/1‑149 (MQ=255) aGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGcaca < 1:134751/149‑1 (MQ=255) ggCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGaa < 7:218864/149‑1 (MQ=255) ccGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGc < 6:123002/149‑1 (MQ=255) ccGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGc < 1:43652/149‑1 (MQ=255) ctctCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAg > 1:100947/1‑149 (MQ=255) gTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTg < 4:153594/146‑1 (MQ=255) gTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTg < 2:100947/146‑1 (MQ=255) cccTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTc < 4:73210/149‑1 (MQ=255) ccTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTCg > 3:262386/1‑149 (MQ=255) ttGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCGAGTGCGAACTCGTg > 8:99855/1‑149 (MQ=255) aTAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTCGTGCTCcagc < 4:161472/148‑1 (MQ=255) aTAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTCGTGCTCcagc > 3:161472/1‑148 (MQ=255) aTTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTCGTGCTCcag < 6:233601/144‑1 (MQ=255) aTTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTCGTGCTCcag > 5:233601/1‑144 (MQ=255) ggCCCGCCGCGCTGACTATGACGATCTGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGATAATGGCCAGTGCGAACTCTTTCTCCAGCAGCAACGACAAGGCa < 4:162688/149‑1 (MQ=255) ggCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTCGTGCTCCAGCAGCAACGACAAgg > 3:81747/1‑147 (MQ=255) cgCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGACTTGTCGGTACCGCGCATCAGCTCGGCCAGTTAGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTCGTGCTCCAGCAGCAACGACAAgg > 1:82360/2‑147 (MQ=255) ccgccgCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTCGTGCTCCAGCAGCAACGACAAGGCAGc > 4:9067/1‑148 (MQ=255) ccgccgCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTCGTGCTCCAGCAGCAACGACAAGGCAGc > 4:12761/1‑148 (MQ=255) | GCCGGCCAAGCACCTTGCGCTGGCGGAACAGGTCGACGAACACCGAGACCTTGCTTTTTACCGCCAGGGTGTCGAGCGGCTTGTGCAGAAAGTCCACGGCCCCGCTCTCGTAGCCCTTGAAGGCATAATTCATCTCGCGGCCCGCCGCGCTGACGAAGACGATCGGGATGTGCTTGGTCTTGTCGGTACCGCGCATCAGCTCGGCCAGTTCGAAACCGTTCATGCCCGGCATCTGCACATCGAGAATGGCCAGTGCGAACTCGTGCTCCAGCAGCAACGACAAGGCAGC > NC_002947/4287327‑4287615 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |