| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,932,640 | +C | intergenic (‑107/+43) | rluA ← / ← minE | bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,932,638 | 1 | . | C | 100.0% | 50.6 / NA | 19 | intergenic (‑105/+45) | rluA/minE | bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (11/8); total (11/8) | |||||||||||
CTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTG‑CCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTT > NC_002947/1932500‑1932763 | cTTCGACGAGGATCTGGACATTCGACAGCGGCATTGCAGGGCTCCCGAAAATCGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTCCAAAGGATATGCGTCCCCTGTCGGAGCGGGCTTGCCCGCGAAg < 6:133407/148‑1 (MQ=37) aCATTCCACAGCGGCATTGCCGGCCTCACTAAAATCGCATTAAACGCGGGGGCCGCTTTGCGGCCCTGCGCGGGAACGCCCGCTCCTACAAAGTATATGCGCCCCCTGTCGGTGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGcc < 4:117832/146‑1 (MQ=255) cGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCGACAAAGGAGATGCGTCCCCGGTAGGAGCGGGCTTGCCCGCGCAGGGCTGCAAGGCAGCCCCAAAtt > 2:151120/1‑148 (MQ=38) gaccggggCTTTGCCGGTCTCACCAAAATCCCATTAACCGGGGGGGCGGGTTGGGGGCCGTGCGGGGGAACGCCCGCTCCTACAACGGATAGGCGGCCCCTTTCGGCGGGGGGTGGCCCGCGAAGGGCTGCAAGGCAGCCCCAAAtt < 2:145892/141‑1 (MQ=255) ttGCAGTTCTCACTAAAATAGCAGTAAACGCTGGGGCCTCTTTGCGGCCATTCGCGGCCAAGCCCGTGCCTAAAAAGTATATTCGTCCCCTGTAGTAGCGGGCTTGCCCGCGAATGGCTGCAAGTCAGCCACAAATTGTCGACTAcgc < 4:114023/148‑1 (MQ=255) gAAAATAGCAGTAAACGCTGGGGCCGTTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCCAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATcc > 4:37444/1‑148 (MQ=255) gAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTTGGAGCGGGCTTGCCCGCGCAGGGCTGCCAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATcc > 5:154411/1‑148 (MQ=38) cAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAggg > 3:82212/1‑147 (MQ=255) gCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTAGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCa > 2:31537/1‑148 (MQ=255) tttGGGGCCCTGCGCGGGCACGCCCGCTCAAACAATGGATATGCGCCCCGTGTAGGAGGGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATc < 5:112852/148‑1 (MQ=38) tttGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCGGTTGGCGCGGGCTTGCCCGCGCAGGGCGGCAAGGCCGCCCGAAATTGTCGGCTCCCCGCGTCAGCGCTGCGGCCGGGTGATGTTCAGCTCCAGAATc > 4:26787/1‑148 (MQ=255) gggCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATAAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTgg > 8:46465/1‑148 (MQ=255) ggCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGt > 6:39054/1‑148 (MQ=255) cGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCCGc > 7:160909/1‑148 (MQ=255) aaaGGATAGGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATg < 1:6841/147‑1 (MQ=255) aGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGcac < 4:82212/148‑1 (MQ=255) ggATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCGCTGATCCgc > 2:151448/1‑86 (MQ=25) gATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCGCTGATCCgcg < 1:151448/87‑3 (MQ=21) gTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGtt > 1:106217/1‑148 (MQ=255) | CTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTG‑CCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTT > NC_002947/1932500‑1932763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |