New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 23014540 (0.000)43 (1.360) 31/286 0.1 100% intergenic (‑98/‑233) sbcD/PP_5497 exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
?NC_002947 5545321 = NA (NA)intergenic (‑461/+416) rpsF/rlmB 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB

CGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAT  >  NC_002947/2301308‑2301601
                                                                                                                                                  |                                                                                                                                                   
attgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                    >  1:28045‑M1/146‑148 (MQ=255)
 ttgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctct                                                                                                                                                   >  5:143133‑M1/145‑148 (MQ=255)
  tgggaaccatagcaaagtattcggcggctgacctaccctgatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc                                                                                                                                                  >  1:35382‑M1/144‑148 (MQ=255)
  tgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc                                                                                                                                                  >  6:6402‑M1/144‑148 (MQ=255)
   gCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtcta                                                                                                                                                 <  1:171604‑M1/148‑5 (MQ=255)
    ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                                 >  3:88162‑M1/142‑147 (MQ=255)
    ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                                 >  8:41295‑M1/142‑147 (MQ=255)
    ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                                 >  6:31484‑M1/142‑147 (MQ=255)
     gaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                                >  4:206‑M1/141‑147 (MQ=255)
     gaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                                >  1:72444‑M1/141‑147 (MQ=255)
     aGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatc                                                                                                                                               <  5:60557‑M1/148‑7 (MQ=255)
        ccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGaa                                                                                                                                            >  6:93100‑M1/138‑148 (MQ=255)
        cTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGTCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaa                                                                                                                                             >  6:32310‑M1/1‑139 (MQ=255)
           tagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTg                                                                                                                                         >  4:24354‑M1/135‑148 (MQ=255)
              cccAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaa                                                                                                                                       <  1:133253‑M1/147‑15 (MQ=255)
               ccAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaag                                                                                                                                      >  1:3931‑M1/1‑132 (MQ=255)
               aaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCa                                                                                                                                     <  8:98292‑M1/18‑1 (MQ=255)
                 agtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgctCTCTCATAGAACTGCGCATc                                                                                                                                   <  5:108600‑M1/20‑1 (MQ=255)
                   tattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCAc                                                                                                                                 >  4:29394‑M1/127‑148 (MQ=255)
                      tcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTa                                                                                                                              >  6:18919‑M1/124‑148 (MQ=255)
                      tcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTa                                                                                                                              >  1:174514‑M1/124‑148 (MQ=255)
                       cAGTCGGAGGTATGAAACAGATGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccac                                                                                                                             <  8:104948‑M1/148‑25 (MQ=255)
                        ggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTAc                                                                                                                             <  3:132368‑M1/26‑1 (MQ=255)
                        ggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatctcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTAc                                                                                                                             >  7:149827‑M1/122‑147 (MQ=255)
                         gTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactg                                                                                                                           >  3:137216‑M1/1‑122 (MQ=255)
                         gTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactg                                                                                                                           >  3:139548‑M1/1‑122 (MQ=255)
                         gTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactg                                                                                                                           >  7:118137‑M1/1‑122 (MQ=255)
                         gTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGAGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagctaacccactg                                                                                                                           >  3:136318‑M1/1‑122 (MQ=255)
                          cggctgacctatccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGa                                                                                                                          >  3:45979‑M1/120‑148 (MQ=255)
                              tgacctacccggatcagtcggcgaatgcttttctagatctctatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTa                                                                                                                      >  2:65630‑M1/116‑148 (MQ=255)
                              aGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGTGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCATCTGTTCGGCCCGATCGCGGGCAATCCAGCTtctatcaaacaaaagataacccactgttctt                                                                                                                      <  4:75215‑M1/148‑32 (MQ=255)
                                gTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttcttt                                                                                                                     >  2:39101‑M1/1‑115 (MQ=255)
                                gTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacacactgttcttt                                                                                                                     >  8:160764‑M1/1‑115 (MQ=255)
                                  ctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAg                                                                                                                  >  4:154451‑M1/112‑148 (MQ=255)
                                    acccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAggg                                                                                                                <  6:17894‑M1/39‑1 (MQ=255)
                                      ccggatcagtcggcgaattcttttctagatctcgatgtcagtgaagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGa                                                                                                               >  8:54775‑M1/108‑147 (MQ=255)
                                      aaCAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcg                                                                                                               >  4:61528‑M1/1‑109 (MQ=255)
                                        ggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCAGCACTTACTGATTTAGCAGGGAc                                                                                                              <  6:171420‑M1/41‑1 (MQ=255)
                                            cagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCtgtg                                                                                                        >  4:101137‑M1/102‑148 (MQ=255)
                                               tcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGa                                                                                                     <  6:90555‑M1/50‑1 (MQ=255)
                                                         tgttgttgtCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGTCCGCTGTGCGGCACGATCGAGGGCCAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgggg                                                                                           >  7:54775‑M1/1‑90 (MQ=255)
                                                          ttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGcc                                                                                          <  3:13019‑M1/61‑1 (MQ=255)
                                                            tGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggt                                                                                          <  1:39101‑M1/146‑60 (MQ=255)
                                                                 tCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttatagcgaaaaaaaaaggcgcgcggggtaaatggc                                                                                   >  8:69778‑M1/1‑82 (MQ=255)
                                                                       cGGGCAAGCGGGGAAAGGGCGGTAGGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaa                                                                             <  7:75654‑M1/148‑73 (MQ=255)
                                                                          gtcagtgcagagctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggggatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAAcg                                                                          >  2:183766‑M1/72‑148 (MQ=255)
                                                                             aGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttc                                                                       <  8:118137‑M1/148‑79 (MQ=255)
                                                                              gCGGGGAACGGGCGGTATGGTAACCCACGCGTGGGGCCGCTGTGCGGCCCGATCGCGGTCAAGCCAGCTtctctcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagttttca                                                                      <  1:53324‑M1/148‑80 (MQ=255)
                                                                                ggggAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcact                                                                    >  6:155636‑M1/1‑67 (MQ=255)
                                                                                  agatctgacgtcatgcgcagcctgtgtgctgtgcgacatcgcagcccggatgggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCAt                                                                  >  4:136318‑M1/64‑148 (MQ=255)
                                                                                   gAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgataaaaacaggcgcgcggggtcaatggcggcgaagtgttcactctt                                                                 >  3:29797‑M1/1‑64 (MQ=255)
                                                                                       tgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCAc                                                             <  8:44102‑M1/90‑1 (MQ=255)
                                                                                       gggCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgggggcgatggcggcgaagtgttcactcttctat                                                             >  3:101137‑M1/1‑60 (MQ=255)
                                                                                            gTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtg                                                        <  5:122084‑M1/148‑94 (MQ=255)
                                                                                             tATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtgg                                                       >  1:129848‑M1/1‑54 (MQ=255)
                                                                                               tGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgtggcctcttctttacgtggtc                                                     >  5:18919‑M1/1‑52 (MQ=255)
                                                                                                 gTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggctgcgaagtgttcactgttgtatacgtggtc                                                     >  8:149827‑M1/1‑50 (MQ=255)
                                                                                                  gcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCg                                                  >  4:87243‑M1/48‑148 (MQ=255)
                                                                                                     tcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCGCAGCCGgtg                                               >  2:121532‑M1/45‑148 (MQ=255)
                                                                                                     tcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTCATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGAGCATGGCACCGGCTGCGCCGgtg                                               <  3:38548‑M1/104‑1 (MQ=255)
                                                                                                     cccAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacag                                                 >  3:168584‑M1/1‑46 (MQ=255)
                                                                                                      ccAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagctt                                              <  4:85576‑M1/148‑104 (MQ=255)
                                                                                                        tgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCGCAGccggtgcca                                            >  2:70987‑M1/42‑145 (MQ=255)
                                                                                                             gctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGAGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCggg                                       <  6:160833‑M1/112‑1 (MQ=255)
                                                                                                                  ccGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgaca                                  <  4:168584‑M1/148‑116 (MQ=255)
                                                                                                                    gacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGTGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGccc                                <  6:33752‑M1/119‑1 (MQ=255)
                                                                                                                           ggCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaac                         <  4:137216‑M1/148‑125 (MQ=255)
                                                                                                                           ggCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaac                         <  4:139548‑M1/148‑125 (MQ=255)
                                                                                                                            gCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctataggtggtcacagcaagctgtgccgacagggattcccg                        >  3:134406‑M1/1‑23 (MQ=255)
                                                                                                                             cccGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgc                       >  1:154100‑M1/1‑22 (MQ=255)
                                                                                                                              ccGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgc                       >  1:98588‑M1/1‑21 (MQ=255)
                                                                                                                              ccGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgc                       >  1:87061‑M1/1‑21 (MQ=255)
                                                                                                                               ccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATg                     >  7:44102‑M1/19‑148 (MQ=255)
                                                                                                                                cggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATgg                    <  6:24804‑M1/131‑1 (MQ=255)
                                                                                                                                  tctcgggcAAGCCAGCTtctatcaaacaaaagataccccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggctgcgaagttatcactcttctatacgtggtcacagaaagctgtgccgacagcgattaacgccgatg                  >  2:3080‑M1/4‑17 (MQ=255)
                                                                                                                                         tgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCCCATGGACCACGCtt           <  5:127245‑M1/140‑1 (MQ=255)
                                                                                                                                          aaGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgg          <  7:22464‑M1/148‑140 (MQ=255)
                                                                                                                                          aaGCCAGCTgctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgg          <  7:118119‑M1/148‑140 (MQ=255)
                                                                                                                                            gCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggc        <  4:129739‑M1/148‑142 (MQ=255)
                                                                                                                                               atCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGAccacgctgtcctg      <  8:62050‑M1/145‑7 (MQ=255)
                                                                                                                                                gCTtctatcaaacaaaagataccccactgttctttctagcgaacaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccact    <  5:128915‑M1/148‑146 (MQ=255)
                                                                                                                                                gCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccact    <  2:180616‑M1/148‑146 (MQ=255)
                                                                                                                                                gCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccact    >  5:163869‑M1/1‑3 (MQ=255)
                                                                                                                                                 cTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatt             >  5:165034‑M1/1‑2 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  >  2:165743‑M1/1‑1 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  >  2:1281‑M1/1‑1 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  >  5:166912‑M1/1‑1 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccattt            <  6:165034‑M1/138‑138 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
CGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAT  >  NC_002947/2301308‑2301601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.