New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4893579	22 (0.690)	3 (0.120)	3/236	4.0	16.3%	intergenic (+54/‑154)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	= 4893604	13 (0.500)					intergenic (+79/‑129)	pyk/PP_4302	pyruvate kinase/urea transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGAC  >  NC_002947/4893439‑4893726                                                                                                                                             |                                                                                                                                                    cGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCt                                                                                                                                              <  5:174178/148‑1 (MQ=255)        acacGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGCCACAAGGCCGCTCCCACAGGGCCCCGCTGGCCCaa                                                                                                                                       >  7:118409/1‑148 (MQ=255)         cacGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAg                                                                                                                                      <  7:151088/148‑1 (MQ=255)                 tgATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATg                                                                                                                                <  7:92000/146‑1 (MQ=255)                  gATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCCCAAGGGAATGCAg                                                                                                                             >  4:26502/1‑148 (MQ=255)                      aCCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCGGGCACAAGGGAATGCAGTc                                                                                                                           >  4:124383/1‑146 (MQ=255)                           tGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACCCGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTGGCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTgg                                                                                                                    <  7:115989/148‑1 (MQ=255)                           tGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTgg                                                                                                                    <  7:24763/148‑1 (MQ=255)                              cGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAg                                                                                                                 <  2:8911/148‑1 (MQ=255)                                tGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCg                                                                                                               <  5:144833/148‑1 (MQ=255)                                        ggCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTtgt                                                                                                        <  7:163716/147‑1 (MQ=255)                                                     cGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCCCGCTGGCACAAGGGAATGCAGTCCCTGTGGGCGCGGCCTTGTGTAGCGATTGGacg                                                                                          >  8:148850/1‑146 (MQ=255)                                                         tAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACCCAAGGCCGCTCCCCCAGGGCCCCGCAGGCACAAGGGGATGCCGGCCCTGGGGGAGCCGCCGTGTGTCGCGCTTGGCGGGcca                                                                                      >  3:171220/1‑146 (MQ=255)                                                           acacGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAACGCCGCACCCACAAGGCCACGCTGGCACAAGGGAATGCACTCACAGTGGGAGCGGCCATGTGTCGCGAATTGAGGGCAAAg                                                                                    >  2:3438/1‑148 (MQ=255)                                                                         gagaCTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCCCAGGGCCACGCTGGCCCAAGGGCATGCAGTCCCAGTGGGAGCGGCCGTGTGTCGCGCTTGGAGGGCCAAGCCCTCCCTGAATAc                                                                      >  1:23442/1‑148 (MQ=38)                                                                              tttGATCTGAGATTGCCGGTGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCACCCACAGCGCCACCCTGGCACAAGGGAATGCCGTCCCTGTGGGCGCGGGCGTGGGTCGCGCTTGGAGGGGAAACCCCACCCGGAATAACGct                                                                  >  6:136378/1‑147 (MQ=25)                                                                                                     gcgTGGCGCCCTTTGCGCCACACACGGCCGCTCCCACCGGGCCCCGCTGGCAAATGGTAATGCTGCCCGTGTGGGCGGGGCCTTGTGGCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAgg                                          <  6:8084/148‑1 (MQ=255)                                                                                                            gcCCCTTTCGCGACCAAAACCCCCTCCCACAGGGCCCCCCGGGCACCAGGGAATGCAGTCCCTGTGGGAGCCGCCGTGTGTAGCGCATTGAGGGCAAAACCAACCAGAAAAAACACTCGACCCGCCCCCCGAAAAACGCGGcccca                                     >  2:3308/1‑144 (MQ=255)                                                                                                                            aaGGCCGCTCCCACAGGGCCACGCTGGCACAAGGTAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTcccc                   <  2:23442/148‑1 (MQ=255)                                                                                                                            aaGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTccc                    >  2:179349/1‑147 (MQ=255)                                                                                                                                             gCCACGCTGGCACATGGTAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCactgac  <  1:3438/148‑1 (MQ=255)                                                                                                                                             gCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGACCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCAAAAGAGGCCCACCGCTCCCCCATCAAACTACactgac  >  2:97723/1‑148 (MQ=255)                                                                                                                                             |                                                                                                                                                    CGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGAC  >  NC_002947/4893439‑4893726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.