New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5988757	19 (0.590)	4 (0.130)	4/274	4.0	15.4%	intergenic (+51/‑495)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
	?	NC_002947	5988979 =	26 (0.860)					intergenic (+273/‑273)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAG  >  NC_002947/5988610‑5988901                                                                                                                                                    |                                                                                                                                                 ccAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGcgcc                                                                                                                                                  >  7:68369/1‑148 (MQ=255)                      ccGGGCCAAGGTGATGCAGACGGCCAAGGAGTCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTACCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCgg                                                                                                                              <  3:121423/147‑1 (MQ=255)                               ggTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGGGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGc                                                                                                                    <  1:129690/148‑1 (MQ=255)                                                              gagctggagcGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCtg                                                                                     >  7:111884/1‑148 (MQ=255)                                                                 cttgagcGGTTGTTTGATTCGGATGCGGAATGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTTTGAGATTGGGCGCCGCCAGCGCGTCGCTTCGCGGGTAAACCCGCTCCTACGATTGTTTCGGGCCAGTGATTCCTGTgg                                                                                  >  6:95990/4‑148 (MQ=37)                                                                              ttGATTCGGATGCGGACTGAGGCCTTTTGGCGCGGGCCTTGAGGGGTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTGCGCGGGGACACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGa                                                                     <  7:140209/148‑1 (MQ=37)                                                                                  ttCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGccc                                                                 >  2:27826/1‑148 (MQ=255)                                                                                                     cTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGata                                              >  8:15549/1‑148 (MQ=255)                                                                                                                tGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTac                                   <  8:68369/148‑1 (MQ=255)                                                                                                                    ttGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTacaaa                                >  1:3359/1‑147 (MQ=255)                                                                                                                        gggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCgg                                                                                                   >  4:7478/1‑76 (MQ=255)                                                                                                                        gggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAgg                           <  6:115690/148‑1 (MQ=255)                                                                                                                        gggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAg                            <  7:15549/147‑1 (MQ=255)                                                                                                                         ggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCggg                                                                                                  <  3:7478/76‑1 (MQ=255)                                                                                                                             tcagcgCCTGGGCGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCGGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCGCGATATCGCGTCGTACAAACAAGGCGGTc                      <  7:69230/143‑1 (MQ=2)                                                                                                                                 tGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTACACCCGCTCCTACGTTTGTTTCGGGCCATTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTcgcgc                  <  5:95990/148‑1 (MQ=255)                                                                                                                                  gCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTcgcgc                  <  1:170474/147‑1 (MQ=255)                                                                                                                                    cTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTcgcgcgc                <  8:111884/147‑1 (MQ=255)                                                                                                                                        gagaTTGGGCGCCGCCCGCGCGGCGCTGCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCt            <  5:117050/147‑1 (MQ=255)                                                                                                                                                 cgccgcCCGCGCGGCGCGTCGCGGGTAAACCCGCTCCTACGGTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGGCGTACAAACAAGGCGCTCGCGAGCGCCTGGCACaggag  <  8:107974/148‑1 (MQ=25)                                                                                                                                                    |                                                                                                                                                 CCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAG  >  NC_002947/5988610‑5988901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.