New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 464759517 (0.530)3 (0.130) 3/212 3.6 20.4% intergenic (+48/+83) fusB/PP_4112 elongation factor G 2/sulfate transporter
?NC_002947 = 4647625 11 (0.470)intergenic (+78/+53) fusB/PP_4112 elongation factor G 2/sulfate transporter
Rejected: Coverage evenness skew score above cutoff.

GTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGC  >  NC_002947/4647478‑4647772
                                                                                                                                                   |                                                                                                                                                   
gTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGcccc                                                                                                                                                     >  1:124705/1‑148 (MQ=255)
        gCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTTAACCCGCTCCTAAAGGGTGGCCGCAGGCCCACACCTTGTGCGCCCCCCGGtt                                                                                                                                               >  5:72129/1‑145 (MQ=38)
             gCCGAGGCCCGGGCGAGGATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCgg                                                                                                                                        <  6:155594/148‑1 (MQ=255)
             gCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGc                                                                                                                                          <  2:158140/146‑1 (MQ=255)
               cGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGt                                                                                                                                      <  2:124705/148‑1 (MQ=255)
                gAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGtt                                                                                                                                     <  2:76416/148‑1 (MQ=255)
                   gCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTAc                                                                                                                                  <  6:154230/148‑1 (MQ=255)
                                                                gtgTAAGCGGTAGTCCTTTGCCGGCCTCTTCGGGGGTAAACCCGCTCCTACAGGAGGGCCGCCGGCCCAAACTTTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTc                                                                                     <  6:72129/146‑1 (MQ=37)
                                                                                     cGGCTTCTTCCCGTGAAAACCCGCGCCTACCGGAGGCCCGCAGGCCCAACATTTGTGCGCCCCCCTGTAGGAGCGGTTTAACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGctt                                                                <  2:20906/148‑1 (MQ=37)
                                                                                         ctctTCGCGGTTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGGGGTTTTACGCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTg                                                            <  6:32927/148‑1 (MQ=255)
                                                                                          tctTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCACACATTGTGCGCCCCCCTGTAGGAGCGGGTTTTCCCGCGAAGAGGCCGGCACAGACCGGAACAGTTTTCCATGCTGCTCGCCCGCCCGCGTCAACAGCTTCTTGc                                                           >  5:84322/1‑148 (MQ=39)
                                                                                               gcgGGTAACCCCGCGCCTACAGTAGGCCCGCAGGCCCAAACATTGTCCGCCCCCCTGTCGGAGCGGTTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCAc                                                         <  3:37720/145‑1 (MQ=38)
                                                                                                   gTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCACCAGCTTCTTGCACCGCTCCg                                                  >  5:38002/1‑148 (MQ=255)
                                                                                                                     gATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACgcgc                                 >  4:45845/1‑147 (MQ=255)
                                                                                                                            gCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCtt                         >  7:127334/1‑148 (MQ=255)
                                                                                                                                     aaCATGGGGCGCCCCCTTTTCGTAGGGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCTCAAATGCTTGCCCGCCtt                <  4:138612/148‑1 (MQ=255)
                                                                                                                                      aCATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCGTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTg               >  6:3756/1‑148 (MQ=255)
                                                                                                                                                   cccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGCCCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTcgc  >  7:110076/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGC  >  NC_002947/4647478‑4647772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.