| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 2 (0.060) | 11 (0.350) +CGGG |
11/282 | 1.9 | 85.0% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 2 (0.060) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
GTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTA > NC_002947/5681274‑5681550 | gtaatacatgcaaacacagacctcctgaggtgggcggggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggc < 3:53436‑M2/2‑1 (MQ=255) gcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttttgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgccccgccgggGCGGCggcgcc > 6:49937‑M2/138‑147 (MQ=255) aaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgcaaggggcgcgcagcggcccccggcgttgattgccccggcatgaaccgccgggGGGgcggcgcccc > 1:6812‑M2/136‑145 (MQ=255) agacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATc < 3:164686‑M2/19‑1 (MQ=255) cctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGac > 5:28523‑M2/124‑147 (MQ=255) gtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGc < 6:28523‑M2/31‑1 (MQ=255) cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCGGCTGCGCCGCCCTATCGCGCCCCAAGGCCGCGCCCCCACCCGCCCCCCCGGCCCTGCGCCGCGCCTCCGAACCAACGTCAGGTTGCAGAt > 1:53540/1‑148 (MQ=255) aggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCCGCCCTATCGCGCCACAAGGCCGCTCCCACTCCCGCCCACCAGGCCCTGCGCCTCCCATCCTAACCAAGGTCAGGTTGCAGATCcgc > 3:22184‑M2/52‑148 (MQ=255) ggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATACGCGTc > 6:32566‑M2/49‑148 (MQ=255) gcgcGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCCGCCCTATCGCGCCCCCCGGCCGCGCCCCCACCCGCCCCCCCGGCCCCGCGCCGCACCTCCTAACCCACGGCCGGGTGGAGCTCcgcggcc > 1:148545/1‑145 (MQ=255) ccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATAGCCCCACAAGGCCGCTCCCACTACAGACCCCCACGCCCTGCGCCTAACCTACAAAACAAAGTCAGGTTGCAGATCCGCGTCACCCACCagccat > 2:59451‑M2/35‑145 (MQ=255) ttgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCGCATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAc < 2:53540‑M2/124‑1 (MQ=255) atgaaccgccgggGCTGCTGCGCCGCCCTATAGCGACACAAGGCCCCTCCCACTCCAGCCCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTa > 7:117100‑M2/14‑148 (MQ=255) | GTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTA > NC_002947/5681274‑5681550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |