Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,791,9230GA29.6% 37.3 / 11.9 28G639G (GGC→GGT) pvdInon‑ribosomal peptide synthetase
Reads supporting (aligned to +/- strand):  ref base G (10/9);  new base A (8/0);  total (19/9)
Fisher's exact test for biased strand distribution p-value = 2.58e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATCTGTGCGTCACGCAGCATGAATGCCATTCGC  >  NC_002947/4791785‑4792070
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cATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGCTCACATAAGCCAGGTTGCCGGAGTGa                                                                                                                                            >  5:74989/1‑148 (MQ=255)
cATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCACGTTCCCGTAGTg                                                                                                                                             >  2:84637/1‑147 (MQ=255)
               cAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGCCCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGcccc                                                                                                                             >  1:13520/1‑148 (MQ=255)
                aGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGa                                                                                                                                                >  5:9072/1‑128 (MQ=255)
                 gATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAg                                                                                                                                               <  6:9072/128‑1 (MQ=255)
                        aaGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGCCCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGAGCACCCCTGCCTCg                                                                                                                    >  3:27690/1‑148 (MQ=255)
                              aaTCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGACAGGTTAACATATTAAAAATCAACGGGCACCCCTGCCTCGCCACCt                                                                                                              >  2:81961/1‑148 (MQ=255)
                                     tCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGACACCTTAACTTAAAAAACAAACACGGGCACCACTGCCTCGCCACCTGCcgcg                                                                                                        >  4:124460/1‑147 (MQ=255)
                                           aaGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAgcg                                                                                                 >  7:156491/1‑148 (MQ=255)
                                                                aGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGACACCTTAACATAAAAAAAACCCACGGACACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGa                                                                            >  4:72434/1‑148 (MQ=255)
                                                                   gcCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGACACCTTAACATAAAAAAACGAAACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATgg                                                                         >  2:89975/1‑148 (MQ=255)
                                                                             acacCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGGTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAgg                                                               <  5:95660/148‑1 (MQ=255)
                                                                                 cgcgACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGACACCTTAACATAAAAAAAAAAAACGGGCAACCCTGCCTCGCCACCTGCCGCGTTCAGTGCCAGGCACTGTACGCCCCCGATTGCCGGGCCAGGCTCg                                                           >  2:99425/1‑148 (MQ=255)
                                                                                     aCCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGACACCTTAACATAAAAAAAAAAAACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCt                                                       >  4:83059/1‑148 (MQ=255)
                                                                                         ccTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCgg                                                                     >  3:15954/1‑130 (MQ=255)
                                                                                          cTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCggg                                                                    <  4:15954/130‑1 (MQ=255)
                                                                                              ggCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCt                                                <  1:102512/146‑1 (MQ=255)
                                                                                               gCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGa                                              <  1:97716/147‑1 (MQ=255)
                                                                                               gCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGACACCTTAACATAAAAAAAAAACACAGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCCCTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGa                                              >  4:3726/1‑147 (MQ=255)
                                                                                                            gCCCGAGGTGTAGATCACATAAGACACCTTAACATAAAAAAAAAAAACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATc                                >  2:156705/1‑148 (MQ=255)
                                                                                                               cGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGTCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATCtgt                             <  3:113101/148‑1 (MQ=255)
                                                                                                                   gtgtAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATCTGTGCGt                         <  4:168454/148‑1 (MQ=255)
                                                                                                                    tgtAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGCTGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATCTGTGCGTc                        >  5:112048/1‑148 (MQ=255)
                                                                                                                         aTCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATCTGTGCGTCACgca                   >  5:108242/1‑148 (MQ=255)
                                                                                                                             caTAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATCTGTGCGTCACGCAGCAt               <  6:96162/148‑1 (MQ=255)
                                                                                                                              aTAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATCTGTGCGTCACGCAGCAt               >  6:127698/1‑147 (MQ=255)
                                                                                                                              aTAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATCTGTGCGTCACGCAGCAt               >  4:135710/1‑147 (MQ=255)
                                                                                                                                  gCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATCTGTGCGTCACGCAGCATGAAt           <  8:156491/147‑1 (MQ=255)
                                                                                                                                          gCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCCGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATCTGTGCGTCACGCAGCATGAATGCCATTCgc  >  8:122198/1‑148 (MQ=255)
                                                                                                                                          |                                                                                                                                                   
CATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCACTGTACGCCCCCGATGGCCGGGCCAGGCTCGTCCTCGGCCCTGAGCAAGACCTTGATCTGTGCGTCACGCAGCATGAATGCCATTCGC  >  NC_002947/4791785‑4792070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑